Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0731 ATGGAGGAGTGCAGAGCAATAATCCCAACCTATGAAGGAGAAGAACATGTGGTGGCTGCAGCTCATCATATGGTGAAGGCACTAATGGCAAGTAAGAACCTCACGGGGGATTTCAAAAAAATCCTAGTGGATCTTGACACCCACCTGTCCACCATGACCATCCTCAATGAAAGAAAGGGAGATGAATTGAGTGAGGTTGAATTGCGGCTCAAATGTGCAGAGAAGAAGATAATGAATCGGGAGTCGAAGCAGTTGATGATATGGGACTCGGGTTCTAAGCAAGTGTTGGAGTATCTGCAAGCTGTTGAAGAAGTCCAAACCTTGAAAGAAAGTTTGGAGAGCTTGTCTTTGAATGGAGGTGAGAAACAGAAGAGACTACTTCGCCAAGCGGAGAGCATTCTGCAGATCGCAATGGTAAGGCTTGAGGAAGAGCTACTCCACATTCTTCGACACAAGAAGCAATCATTTGAGCCTGAATTCGCATCTTTTCATTCTTGTGAGGAGGTTGTTGTGTATGAAGAATCCATTGTTTCGGTGGAAGATGACATCTCTGAGGACTCATCAAGGAGAGATAGCAATGGGGATGAATCCAAGGAATATACAATAGGTTTGATCAATCCAGAAGTAATTCCTCATCTCAAATCCATTGCAAATGTGATGTTTGCTTCCAACTATGACCAGGAATTTTGCCAGGCTTTCATTGGTGCCCGGAAAGATGCCTTGGATGAGTACTTGGGCATTCTTGAGCTGGAGAAACTCAGCATTGAGGATGTGCTGAGGATGGATTGGGGAAACTTGAACTACGAGATAAAGAAGTGGATCAGGGCTATGAAGATAATCATTCGGGTTTATCTGGCTAGCGAGAAACGGCTATGCGACCACATCTTGGGGGATTTTGGATCCATTAATCCAATTTGCTTTGTTGAAACTTCAAAGGTTTCAATGTTGCGCCTCTTGAATTTTGGTGAAGCTGTAGCAATTGGGCAGCATCTGCCGGAGAAGTTGTTCAGCTTATTGAACATGTATGAGGCTCTGGCAGATCTTCTCCTACACATAGATGCTCTGTTCTCTGAAGAAGCCGGCGCTTCCATCAGGATTGATTTCCACAAGCTTCAAAGGGAATTGGGTGATGCTGCGGGAGCAACTTTTATGGAATTTGAGACTGCTATTGCATCATACACATCAACGAGCCCTTTCCCAGGAGGTGGCATTCTCCATCTCACCAGGTATGTCATGAATTACATCAAGATCCTTACTGAATACAGCAATACGCTCAATTTGCTTCTCAAGGACCAGAATGGGGAGGATCCAGAGCCTCTTATTGAAGCAGAGAATGCGCAGGGTGTTCCTTCTCAAGTAGTCTGTCCAGTAGCTCATCACCTTCGTTCAATCGCATCTCTCCTGGAATCTAACCTTGAAAGCAGATCCAAATTATACAAAGATGTGTCTTTACAACACATATTTTTGATGAACAACATTCACTACATGGTCCAGAAGGTTAAGGGGTCTGAACTAAGGGGTTTCTTTGGTGATGAATGGATCAGGAAGCACATGGTGAAGGTTCAGCAGCGTGTGACAAGCTACGAGAGAACTACTTGGAGTTCAGTCCTTTCTTTGCTTAGAGAAGATGGAAATTCGGGTTCAAGTTCACCCTGGAAGATGATTCTTAAAGAGAGGTGCAGGGGCTTCAGTATTGCTTTTGAGGAGGTATACAAAAACCAGACAGCCTGGTTTATCCCTGATCCTCAGCTTCGTGATAATTTACGAATTTTGACTTCACAGAAAATAATCCAGGCATATCGGGGTTTTATTGGGAGGAACTCTGAAAATCTCAGTGACAAGCACATCAAGTACTCAGCAGATGATCTGGAGAATTATGTCCACAATCTCTTTGAAGGGTCACCAAAATCACTGAACAATAGAAGGAAGTGA 1932 0.4384 MEECRAIIPTYEGEEHVVAAAHHMVKALMASKNLTGDFKKILVDLDTHLSTMTILNERKGDELSEVELRLKCAEKKIMNRESKQLMIWDSGSKQVLEYLQAVEEVQTLKESLESLSLNGGEKQKRLLRQAESILQIAMVRLEEELLHILRHKKQSFEPEFASFHSCEEVVVYEESIVSVEDDISEDSSRRDSNGDESKEYTIGLINPEVIPHLKSIANVMFASNYDQEFCQAFIGARKDALDEYLGILELEKLSIEDVLRMDWGNLNYEIKKWIRAMKIIIRVYLASEKRLCDHILGDFGSINPICFVETSKVSMLRLLNFGEAVAIGQHLPEKLFSLLNMYEALADLLLHIDALFSEEAGASIRIDFHKLQRELGDAAGATFMEFETAIASYTSTSPFPGGGILHLTRYVMNYIKILTEYSNTLNLLLKDQNGEDPEPLIEAENAQGVPSQVVCPVAHHLRSIASLLESNLESRSKLYKDVSLQHIFLMNNIHYMVQKVKGSELRGFFGDEWIRKHMVKVQQRVTSYERTTWSSVLSLLREDGNSGSSSPWKMILKERCRGFSIAFEEVYKNQTAWFIPDPQLRDNLRILTSQKIIQAYRGFIGRNSENLSDKHIKYSADDLENYVHNLFEGSPKSLNNRRK* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0731 643 Coils Coil 98 118 - -
Vvi17g0731 643 Coils Coil 56 83 - -
Vvi17g0731 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 633 IPR004140 GO:0000145|GO:0006887
Vvi17g0731 643 Pfam Exo70 exocyst complex subunit 271 627 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi17g0731 643 Gene3D Exocyst complex component Exo70 77 641 - -
Vvi17g0731 643 SUPERFAMILY Cullin repeat-like 85 632 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0731 Vvi-Chr17 8213976 8215907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0731 1 632 EXO70 exocyst subunit family AT5G61010 47.792 0.0 602