Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0718 ATGCGCGCACTTGCGAGGGCGGGTCAAACGCCGGTGAAGTTGGGGCAGCTGCTGAACGTGTGCACTACCAACGCCCTAGGGCGGGTGATGTTAGGCAGGAGAGTGTTCGGCGACGGCAGCGGAGGCGAAGATCCGAAGGCCGACGAGTTCAAAGAGATGGTGGTGGAGCTGATGGTCCTGGCCGGAGTTTTCAACATCGGCGACTTTGTGCCGGCGCTGGAATGGCTGGACCTGCAGGGCGTAGCTTCCAAGATGAAGAAGCTCCATGCTCGGTTTGACGCTTTCCTGGGCGCCATCGTGGAGGAGCACAAGATCAGCGGCTCTGCTGGTTCCGAGCGTCACGTGGACTTACTCAGCACGTTGATCTCGCTGAAGGATAATGCCGACGGTGAGGGAGGCAAGCTCACCGACGTTGAGATCAAAGCCTTGCTCTTGAACTTGTTCACAGCTGGAACTGACACCTCATCCAGCACAGTGGAGTGGGCCATTGCAGAGCTCATTCGCCACCCTGAAATGATGGCCCAAGCCCAACAAGAGCTGGACGCAGTGGTGGGCCGAGGCAGGCTTGTAACTGATTTGGACCTGCCCAAACTTACCTATCTCCAAGCCATAGTCAAGGAAACCTTCCGCCTGCACCCATCCACGCCCCTCTCCCTCCCTCGGATGGCGGCGGAGAGCTGTGAGATCAACGGCTACCACATCCCCAAAAACGCCACTCTTCTAGTGAACGTGTGGGCCATAGCGCGGGACCCAGAGGTGTGGGAGGAGCCACTAGAATTCAGGCCCAACAGGTTCCTCCCAGGAGGGGAAAGACCAAATGCGGACGTGAGAGGGAATGATTTTGAAGTGATTCCATTCGGGGCTGGCCGGAGAATATGCGCGGGGATGAGCTTGGGACTGAGGATGGTGCACCTGTTAACCGCGACGCTTGTTCATGCGTTCAACTGGGAGTTGCCGGAAGGCCAGGTGGCGGAGAAGCTGAACATGGATGAGGCATATGGGCTGACCCTACAACGAGCCGCCCCACTCATGGTGCACCCACGGCCAAGGCTGTCACCCCAAGTTTTCGGGAAGTAA 1077 0.5831 MRALARAGQTPVKLGQLLNVCTTNALGRVMLGRRVFGDGSGGEDPKADEFKEMVVELMVLAGVFNIGDFVPALEWLDLQGVASKMKKLHARFDAFLGAIVEEHKISGSAGSERHVDLLSTLISLKDNADGEGGKLTDVEIKALLLNLFTAGTDTSSSTVEWAIAELIRHPEMMAQAQQELDAVVGRGRLVTDLDLPKLTYLQAIVKETFRLHPSTPLSLPRMAAESCEINGYHIPKNATLLVNVWAIARDPEVWEEPLEFRPNRFLPGGERPNADVRGNDFEVIPFGAGRRICAGMSLGLRMVHLLTATLVHAFNWELPEGQVAEKLNMDEAYGLTLQRAAPLMVHPRPRLSPQVFGK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0718 358 PANTHER CYTOCHROME P450 98A9 8 355 - -
Vvi17g0718 358 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 286 295 IPR017972 GO:0005506|GO:0016705
Vvi17g0718 358 PRINTS P450 superfamily signature 203 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS P450 superfamily signature 284 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 283 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 293 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 21 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 159 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 PRINTS E-class P450 group I signature 243 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 SUPERFAMILY Cytochrome P450 4 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 Gene3D Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0718 358 FunFam Putative cytochrome P450 superfamily protein 141 348 - -
Vvi17g0718 358 Pfam Cytochrome P450 10 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0718 Vvi-Chr17 8036320 8037491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0718 2 357 Cytochrome P450 AT5G07990 67.507 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0718 K05280 - vvi:100263810 714.531