Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0717 ATGAATCCCCTGGCGCTGATTTTCTGCACGGCTCTCTTCTGCGTCCTCCTCTATCACTTCCTCACGCGCCGCTCCGTCCGCCTCCCTCCGGGGCCCAAGCCATGGCCGATTGTGGGGAACCTCCCGCACCTGGGCCCCGTCCCTCACCACTCCATTGCTGCGCTCGCTAAAACCTACGGCCCTCTCATGCATCTCCGTATGGGCTTCGTCGACGTCGTGGTGGCCGCCTCCGCCTCCGTTGCTGCTCAGTTCTTGAAAACTCATGATGCTAATTTCTCCAACAGGCCTCCGAATTCAGGTGCCAAGCATATCGCTTACAACTATCAGGATCTGGTGTTCGCTCCCTACGGCCCCCGGTGGCGCATGCTCCGCAAGATTTGCTCCGTCCACCTCTTCTCCGGCAAAGCCTTGGATGATTTTCGCCATATCCGACAGGAGGAGGTTGCGGTGCTAACGCGCGCACTTGCGAGGGCGGGTCAAACGCCGGTGAACTTGGGGCAGCTGCTGAACGTGTGTACTACCAACGCCCTAGGGCGGGTGATGTTAGGCAGGAGAGTGTTCGGCGACGGCAGTGGAGGCGAAGATCCGAAGGCCGACGAGTTCAAAGAGATGGTGGTGGAGCTGATGGTCCTGGCCGGAGTTTTCAACATCGGCGACTTTGTGCCGGCGCTGGAATGGCTGGACCTGCAGGGCGTGGCTGCCAAGATGAAGAAGCTCCATGCTCGGTTTGACGCTTTCCTGGGCGCCATCGTGGAGGAGCACAAGATCAGCGGCTCTGCTGGTTCCGAGCGTCACGTGGACTTACTCAGCACGTTGATCTCGGTGAGGGATAATGCCGACGGTGAGGGAGGCAAGCTCACCGACGTTGAGATCAAAGCCTTGCTCTTGAACTTGTTCACAGCTGGAACTGACACCTCATCCAGCACAGTAGAGTGGGCCATTGCAGAGCTCATTCGCCACCCTGAAATGATGGCCCAAGCCCAACAAGAGCTGGACGCAGTGGTGGGCCGAAGCAGGCTTGTAACTGATTTGGACCTGCCCCAACTCACCTATGTCCAAGCCATAATCAAGGAAACCTTCCGCCTGCACCCATCCACGCCCCTCTCCCTCCCTCGGATGGCGGCGGAGAGCTGTGAGATCAACGGCTACCACATCCCCAAAAACGCCACTCTTCTAGTGAACGTGTGGGCCATAGCGCGGGACCCAGAGGTGTGGGAGGAGCCACTAGAATTCAGGCCCAACAGGTTCCTCCCAGGAGGGGAAAGACCAAATGCGGACGTGAGAGGGAATGATTTTGAAGTGATTCCATTCGGGGCTGGCCGGAGAATATGCGCGGGGATGAGCTTGGGACTGAGGATGGTGCACCTGTTAACCGCGACGCTTGTTCATGCGTTCAACTGGGAGTTGCCGGAAGGCCAGGTGGCGGAGAAGCTGAACATGGATGAGGCATATGGGCTGACCCTACAACGAGCCGCCCCACTCATGGTGCACCCACGGCCAAGGCTGTCACCCCAAGTTTTCGGGAAGTAA 1530 0.5869 MNPLALIFCTALFCVLLYHFLTRRSVRLPPGPKPWPIVGNLPHLGPVPHHSIAALAKTYGPLMHLRMGFVDVVVAASASVAAQFLKTHDANFSNRPPNSGAKHIAYNYQDLVFAPYGPRWRMLRKICSVHLFSGKALDDFRHIRQEEVAVLTRALARAGQTPVNLGQLLNVCTTNALGRVMLGRRVFGDGSGGEDPKADEFKEMVVELMVLAGVFNIGDFVPALEWLDLQGVAAKMKKLHARFDAFLGAIVEEHKISGSAGSERHVDLLSTLISVRDNADGEGGKLTDVEIKALLLNLFTAGTDTSSSTVEWAIAELIRHPEMMAQAQQELDAVVGRSRLVTDLDLPQLTYVQAIIKETFRLHPSTPLSLPRMAAESCEINGYHIPKNATLLVNVWAIARDPEVWEEPLEFRPNRFLPGGERPNADVRGNDFEVIPFGAGRRICAGMSLGLRMVHLLTATLVHAFNWELPEGQVAEKLNMDEAYGLTLQRAAPLMVHPRPRLSPQVFGK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0717 509 SUPERFAMILY Cytochrome P450 29 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 PANTHER CYTOCHROME P450 98A9 7 506 - -
Vvi17g0717 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vvi17g0717 509 Pfam Cytochrome P450 29 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0717 509 FunFam Red aleurone1 21 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0717 Vvi-Chr17 8011925 8014137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0717 4 508 Cytochrome P450 AT5G07990 67.647 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0717 K05280 - vvi:100232999 1006.51