Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0715 ATGCCGGTTGCAGAAAGCTACAAGGATGGGTGGACTAGGGTCAGGCGTCGGGTTGAGAATCGTACTTGGATTGGGATAGATTTGGAAGGCTTTGTGAGGACTTTACCTTGGACTAGTGGGGAAGTGTGCTTGAAGTATCAGTTACCCGGTGAAGATCTCGACGCTTTGATCTCGGTTACCAACGATGAGGATCTTGAACACATGATGCTCGAGTACAATCGATTGTGCCACCCATCCAACAAGCAGGCCAGACTCAGGTTATTTCTCTTCCCGCTGACCCCTCCTGCATCCACCAGTTTCGGTTCCAACGAGACCAAATCGGAGCGGCAGTGGTTCGTGGACGCACTGAATTCTATGCAGATCCAGCCTCTGGAAGGTTCTTCACCTCAGGCGGCGGCCTCCGAGACCAATCCGGATTTTCTGTTTAGGTTGGATAAAGGGCTCGCTCCGCCTCCCCCCGTGAAATTGCTTCCCAAGAATTATTCAATGAGATCGGATCCAGGATCGGAAATTCCTTATAAATTATAA 528 0.5038 MPVAESYKDGWTRVRRRVENRTWIGIDLEGFVRTLPWTSGEVCLKYQLPGEDLDALISVTNDEDLEHMMLEYNRLCHPSNKQARLRLFLFPLTPPASTSFGSNETKSERQWFVDALNSMQIQPLEGSSPQAAASETNPDFLFRLDKGLAPPPPVKLLPKNYSMRSDPGSEIPYKL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0715 175 MobiDBLite consensus disorder prediction 142 175 - -
Vvi17g0715 175 PANTHER OS05G0427100 PROTEIN-RELATED 38 159 - -
Vvi17g0715 175 SMART PB1_new 2 92 IPR000270 GO:0005515
Vvi17g0715 175 Pfam PB1 domain 38 91 IPR000270 GO:0005515
Vvi17g0715 175 SUPERFAMILY CAD & PB1 domains 37 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0715 Vvi-Chr17 7980105 7980632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0715 43 121 MAP Kinase Kinase Kinase AT1G79570 42.500 1.40e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0715 - - vvi:100852505 346.28