Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0645 ATGCCTTGCTACGGCCTTCAACCATTGCATGATGGGTCCTGCCATTACTTCCTTCACATGCCTGCCAAAAGTGATGCTAGTGGCAATGGCAATACTAATAAAAGGATATGTGCCTTTGTCAATAGGAGCAAACTGAAGATTTTGCTATGTGATGCAAATGTTAATAATTGTAGAGAAGTTGCCACACTTCTGCGAGGATGCTCTTATCAGATGACTTCAGTTGGCTCAACTCGAGAGGTAATCTATGTCCTGAACTGTGAGGGGGCCAGTATCGATATTGTACTTGCTGAAGCTGATCTTCCTATGGCCAACAGCATGAAGATTTTAAAGTACATTACTCAAGATCAAGAGCTGCGATGCATTCCAGTGATGAGTATGTTTGTCCTAACGTTTATCCTCCCTTTCTCCATAGCTAGTTAA 420 0.4238 MPCYGLQPLHDGSCHYFLHMPAKSDASGNGNTNKRICAFVNRSKLKILLCDANVNNCREVATLLRGCSYQMTSVGSTREVIYVLNCEGASIDIVLAEADLPMANSMKILKYITQDQELRCIPVMSMFVLTFILPFSIAS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0645 139 Gene3D - 35 130 - -
Vvi17g0645 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 45 126 IPR045279 GO:0009736
Vvi17g0645 139 SUPERFAMILY CheY-like 43 127 IPR011006 -
Vvi17g0645 139 ProSiteProfiles Response regulatory domain profile. 46 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0645 Vvi-Chr17 7096186 7098427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0645 38 126 Response Regulator Gene Family AT5G61380 57.303 2.65e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0645 K12127 - vri:117904862 147.132