Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0603 ATGGAAAACCCATCATTGAGTCTCTCATCATTCTTGAATATATCGATGAAACCTGGAAGAATGCTCCCCGGTTGCTGCCTGATGATCTATGAAAGAGCCAAAGTTCGCTTCTGGGCCAGTTTTCTCAATCAACAGTTGTTTGAGGATATGGGTCGAGTAATCACATCTGATGGAGAAGCACAAGAGAAAGCCACAAAGGACTTGTTTGAGAAGCTGACAATTTTGGAAGAGGGAATGAAGGATTTCTTTCCAGGGGGCACTCCTTCCATTAATGGTGAAAACATGGGACTCCTGGACATTCTAATGTATGCATTATTTGGTCCGTACAAAGCTCATGAAGAAGTCCTGGGAATGAAGATGATCGACCCAGAAAGGAATTCACTGTTATTCTCATGGGTGATGGCTCTAACGGAGCTACCTGTGGTGAAAGAGTCAACCCCTCCTCATGAGAAGCTCGTGGCCCTTGTTCAGTTTATCAGACAGAATGCTCTTCAGTCCTGTGTGGCTTGA 510 0.4471 MENPSLSLSSFLNISMKPGRMLPGCCLMIYERAKVRFWASFLNQQLFEDMGRVITSDGEAQEKATKDLFEKLTILEEGMKDFFPGGTPSINGENMGLLDILMYALFGPYKAHEEVLGMKMIDPERNSLLFSWVMALTELPVVKESTPPHEKLVALVQFIRQNALQSCVA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0603 169 SUPERFAMILY GST C-terminal domain-like 30 161 IPR036282 -
Vvi17g0603 169 CDD GST_C_Tau 30 159 IPR045074 GO:0004364|GO:0006749
Vvi17g0603 169 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 28 166 IPR010987 -
Vvi17g0603 169 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 29 152 IPR045073 -
Vvi17g0603 169 Gene3D - 29 166 - -
Vvi17g0603 169 FunFam Glutathione S-transferase U10 29 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0603 Vvi-Chr17 6702005 6702672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0603 30 164 Glutathione S-transferase Gene Family AT5G62480 43.478 8.40e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0603 K00799 - vvi:100250043 266.929