Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0602 ATGAACCATACCCAACAGCTCTGCAGTTCTGTGTTGACAAACTGTCAGACCCTCAAGAACCTCAGGCAAGTCCACTTCTATAAGGAGGAAAACAAAGTGAAGTTACATGGGATATGGGCTAGCCCTTATGTAAAGAGAGTAGAAATGACCCTCAAACTTAAAGGCATTTTTGAGTATGTGGAAGAGGATTTGAGGAACAAAAGCCAGTTGCTCCTCCAGTATAATCCTGTCCAAAAGAAGGTTCCTGTACTCATCCACAATGGAAAACCCATTGCTGAGTCATTGATCATCCTTGAATATATTGGTGAAACCTGGAAGAATGGTACTCCTCTTCTGCCTCAGGTTTCCTATAAAAGGGCCAAAGTTCGCTTCTGGGTCAGCTTTGTCCAGCAAGAGGGCAACCTGCTGAAGCCAGTGGTGCAGCTTAGTGGAGGCGCAGCAATGTCAATCTCTATGATGGACATTCTGCATACAGAAACATAG 483 0.4451 MNHTQQLCSSVLTNCQTLKNLRQVHFYKEENKVKLHGIWASPYVKRVEMTLKLKGIFEYVEEDLRNKSQLLLQYNPVQKKVPVLIHNGKPIAESLIILEYIGETWKNGTPLLPQVSYKRAKVRFWVSFVQQEGNLLKPVVQLSGGAAMSISMMDILHTET* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0602 160 FunFam Tau class glutathione S-transferase 27 114 - -
Vvi17g0602 160 SFLD Glutathione Transferase (cytosolic) 33 132 IPR040079 -
Vvi17g0602 160 SUPERFAMILY Thioredoxin-like 23 107 IPR036249 -
Vvi17g0602 160 CDD GST_N_Tau 33 105 - -
Vvi17g0602 160 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 31 109 IPR004045 -
Vvi17g0602 160 SFLD Main (cytGST) 33 132 - -
Vvi17g0602 160 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 30 129 - -
Vvi17g0602 160 Gene3D Glutaredoxin 29 114 - -
Vvi17g0602 160 Pfam Glutathione S-transferase, N-terminal domain 32 102 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0602 Vvi-Chr17 6697687 6699288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0602 28 132 Glutathione S-transferase Gene Family AT1G74590 60.377 3.65e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0602 K00799 K01800 vvi:100265722 187.963