Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0601 ATGGAAGAGGAAAACCAAATTAAGCTACATGGAATGTGGGGTAGCACTTTCACTAAGAGGGTAGAGCTAGCCCTCAAAATTAAGGGCATACCCTATGAGTATATTGAAGAAGATTTGAGCAACAAGAGCCAATTGGTCCTCAAGTACAATCCTGTTCACAAGAAGGTTCCTGTCCTTGTGCACAATGGAAAACCCATCATTGAGTCTCTCATCATTCTTGAATATATCGATGAAACCTGGAAGAATGCTCCCCGGTTGCTGCCTGATGATCCCTATGAAAGAGCTAAAGTTCGCTTCTGGGCCAGTTTTTTCCATCAACAGTTGTTTGAGGATATGGGTCGAGTAATCACATCTGATGGAGAAGCACAAGAGAAAGCCACAAAGGACTTGTTTGAGAAGCTGACAGTTTTGGAAGAGGGAATGAAGGATTTCTTTCCAGGGGGCACTCCTTCCATTAATGGTGAAAACATGGGACTCCTGGACATTCTAATGTGTGCATTATTTGGTCCGTACAAAGCTCATGAAGAAGTCCTGGGAATGAAGATGATCGACCCAGAAAGGAACCCACTGTTATTCTCATGGGTGATGGCTATAACGGAGATACCTGTGGTGCAAGAGTCAACCCCTCCTCATGAGAAACTCGTGGGCCTTGTTCAGTTTATCAGACAGCATGCTCTTCAGTCCTGTGTGGCTTGA 696 0.4454 MEEENQIKLHGMWGSTFTKRVELALKIKGIPYEYIEEDLSNKSQLVLKYNPVHKKVPVLVHNGKPIIESLIILEYIDETWKNAPRLLPDDPYERAKVRFWASFFHQQLFEDMGRVITSDGEAQEKATKDLFEKLTVLEEGMKDFFPGGTPSINGENMGLLDILMCALFGPYKAHEEVLGMKMIDPERNPLLFSWVMAITEIPVVQESTPPHEKLVGLVQFIRQHALQSCVA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0601 231 FunFam Glutathione S-transferase U10 1 85 - -
Vvi17g0601 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Vvi17g0601 231 SFLD Main.3: Omega- and Tau-like 3 226 IPR045073 -
Vvi17g0601 231 Gene3D Glutaredoxin 1 86 - -
Vvi17g0601 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 228 IPR010987 -
Vvi17g0601 231 SFLD Glutathione Transferase (cytosolic) 3 226 IPR040079 -
Vvi17g0601 231 Gene3D - 87 229 - -
Vvi17g0601 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 214 IPR045073 -
Vvi17g0601 231 FunFam Glutathione S-transferase U10 91 229 - -
Vvi17g0601 231 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Vvi17g0601 231 CDD GST_N_Tau 7 80 - -
Vvi17g0601 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vvi17g0601 231 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Vvi17g0601 231 SUPERFAMILY GST C-terminal domain-like 78 223 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0601 Vvi-Chr17 6692866 6693719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0601 2 229 Glutathione S-transferase Gene Family AT1G74590 50.439 1.56e-87 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0601 K00799 - vvi:100250043 472.626