Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0600 ATGCTCTTAGTAGTCAAAAGTGATGGGGAAGCACAAGAGAAAGCCATCAAGGTAGCGTTTGAGAAACTGAAGTTGTTTGAAGAGGGAATGAAGGATTTCTTTCAAGGTGGCACTCATCATATTGATGGTGAGAATATGGGATTCCTAGACATTGTGCTGTGTTCATTATTTGGCGCCCACAAAGTTCAAGAAGTCGTCCTTGGTGTAAAGTTCATCGACCCAGAAAAGTATCCATTGGTATACTCTTGGTTGACAGCTTTGACAGAGCTAGCTGTGGTGAAAGAGTTGCGACCTCCTCATGAGAAGCTGATGGAGATTCTTCAGTTTGTTAGACAGAGTGCCCTTCAATCCTCTGCAGCTTGA 363 0.4353 MLLVVKSDGEAQEKAIKVAFEKLKLFEEGMKDFFQGGTHHIDGENMGFLDIVLCSLFGAHKVQEVVLGVKFIDPEKYPLVYSWLTALTELAVVKELRPPHEKLMEILQFVRQSALQSSAA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0600 120 Gene3D - 1 118 - -
Vvi17g0600 120 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 113 IPR010987 -
Vvi17g0600 120 SUPERFAMILY GST C-terminal domain-like 4 112 IPR036282 -
Vvi17g0600 120 CDD GST_C_Tau 1 109 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0600 Vvi-Chr17 6690633 6690995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0600 4 115 Glutathione S-transferase Gene Family AT5G62480 46.957 3.41e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0600 K00799 - vvi:100260496 157.147