Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0566 ATGTATAGATTCGGAGTATGCAGAGAAATGAGGGGTAGAGTTCCCCAAATTGCTGCTTTGAATTGGTTAGGTTCTCTCAGTCTCTCAAGATCTATTCATAATTTACCTTTTGCAACCATAGAAGTTGAAGAGATATCAGGTTCTCAACCTGCTGAAGTACAAAATTTGGTGCAAGGCAAATGGACAGGATCTACTAGTGGGGAGACAATTGTGGATCCTTTAAATGGAGAACCATTCATCCAAGTTGCTGAGGTAGATGAAACAGGAATACAGCCATTTGTGGACAGCTTGTCCAAGTGCCCCAAACATGGTCTACATAATCCATTTAAAGCACCTGAAAGGTATCTCATGTTAGGAGACATATCCAACAAGGCAGCTCACATGCTTTCCCTGCCCAAGGTTTCCGATTTCTTCACTAGGTTAATACAAAGAGTTGCTCCAAAGAGTTATCAACAGGCTCTTGGTGAAGTTTATGTTACACAAAAATTTCTGGAGAATTTTTCTGGTGATCAGGTTCGTTTCCTGGCGAGGTCTTTTGCAGTGCCAGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCGTTGGCCTTATGGTCCGGTGGCAATTGTTACACCCTTTAATTTCCCTTTGGAGATTCCTGTCCTTCAGTTGATGGGAGCCCTTTACATGGGCAACAAACCCATTCTTAAGGTTGATAGCAAGGTGAGTATTGTTATGGAGCAGATGATTCGATTGCTTCATCATTGTGGGTTGCCTATGGAGGATCTTGACTTTATAAATTCTGATGGAAAGACAATGAACAAACTATTATTGGAGGCAAATCCACGAATGACACTCTTTACTGGTAGTTCCAGAGTGGCAGATAAGTTAGCTGTTGACCTAAAGGGTCGGATTAAATTGGAAGATGCAGGATTTGACTGGAAAATTCTGGGACCAGATGTTCAAGAGGTGGACTATGTTGCATGGGTCTGTGATCAAGATGCATATGCATGCAGTGGACAAAAGTGCTCTGCGCAGTCAATAGTATTCATGCATGAGAACTGGTTTAAAAGTTCACTTATTTCCAGAATGAAAGATCTTGCTGCAAGAAGGAAGTTAGAAGATCTAACTATTGGACCTGTTCTGAGTTTTACAACTGAAGCAATGCTAGAACATATGAATAAGTTGCTTCAGATACCAGGATCAGAGCTACTATTTGGTGGCAAGGCTTTAGAAAATCATTCGATCCCTCCAATTTACGGTGCTCTAAAACCAACAGCCATTTATATTCCGCTTGAAGAAATGCTGAAGGATGGCAATTATGAGCTTGTTACAAGAGAGATTTTTGGACCATTCCAGGTTGTAACTGACTATAAAGACAATCAGCTACCCAGGGTGTTGGAAGCACTTGAGAGGATGCATGCACATTTAACTGCTGCGGTGGTTTCTAATGATTCCCTGTTTTTGCAGGAAGTGATTGGGAAATCAGTGAACGGGACTACTTATGCTGGACTAAGGGCAAGAACAACAGGAGCTCCACAGAATCACTGGTTTGGACCAGCAGGGGACCCAAGAGGGGCAGGAATTGGGACGCCAGAAGCAATAAAGCTTGTTTGGTCGTGTCATAGAGAAATCATATATGATATTGGTCCCCTGCCAAGTCACTGGGAAATTCCACCAGCTACCTGA 1668 0.4245 MYRFGVCREMRGRVPQIAALNWLGSLSLSRSIHNLPFATIEVEEISGSQPAEVQNLVQGKWTGSTSGETIVDPLNGEPFIQVAEVDETGIQPFVDSLSKCPKHGLHNPFKAPERYLMLGDISNKAAHMLSLPKVSDFFTRLIQRVAPKSYQQALGEVYVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIVTPFNFPLEIPVLQLMGALYMGNKPILKVDSKVSIVMEQMIRLLHHCGLPMEDLDFINSDGKTMNKLLLEANPRMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEVDYVAWVCDQDAYACSGQKCSAQSIVFMHENWFKSSLISRMKDLAARRKLEDLTIGPVLSFTTEAMLEHMNKLLQIPGSELLFGGKALENHSIPPIYGALKPTAIYIPLEEMLKDGNYELVTREIFGPFQVVTDYKDNQLPRVLEALERMHAHLTAAVVSNDSLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHWEIPPAT* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0566 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Vvi17g0566 555 SUPERFAMILY ALDH-like 53 522 IPR016161 GO:0016491
Vvi17g0566 555 CDD ALDH_F12_P5CDH 55 543 - -
Vvi17g0566 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 498 IPR016163 GO:0016620
Vvi17g0566 555 FunFam probable aldehyde dehydrogenase 46 304 - -
Vvi17g0566 555 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 31 555 IPR044638 GO:0004029
Vvi17g0566 555 Pfam Aldehyde dehydrogenase family 69 496 IPR015590 GO:0016491
Vvi17g0566 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 304 IPR016162 GO:0016491
Vvi17g0566 555 FunFam Aldehyde dehydrogenase 12 312 500 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0566 1 555 Aldehyde Dehydrogenase Gene Family AT5G62530 80.036 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0566 K00294 - vvi:100251938 1128.24