Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0532 ATGGAGAGGATACAGAGCAAGTGGATAGCTACATTAGCGAGCATATGGATCCAGTGCAGCAGCGGCTCACTCTACACTTTCAGCATCTTCTCTTCGGCTCTCAAATCAAGCCAAGGTTACGACCAATCAACGCTCGACACCGTCTCTGTTGTCAAAGACGTCGGAGCCACCGCCGGTGTTCTCTCCGGCTTCCTCTACTCCGCGGTCGCCGTCCCCCACCGCAGCCGCCGCTCCTCTTCTTGCTTTCTTCGTGGCCCATGGGTGGTTATCGCTGTGGGGGCGATCCAGTGCTTTGCGGGCTATTTCTTCTTATGGCTTTCTGTCGCCGGAGCCATTCCCCGGCAGCCGGTGCCGCTCATGTGCCTCTTCATGTTCCTGACGGCTCATGCTCAGACCTTTTTCAACACGGCTAACGTGGTCACCGCTGTTCACAACTTCCCTGATTTTAGCGGCACAGTTGTTGGCATCATGAAGGGTTTTCTTGGTTTGAGTGGAGCAATATTAATTCAATTATATCAGGCAATATTCAAGGGAAACCCTGCCTCATATCTTCTCATGCTGATGCTGGTGACCACTGTCAATCCTCTGTTGCTCATGTGTTTGGTCAGAATCTATAATACAAAAGAAGGAGATGAGAAGAAGCACCTGAATGGTTTTTCATTGGTTGCTTTAGTTGTAGCTGGTTACCTGATGGCCTTAATAATCTTAGAGAACATCCTCACTTTGCAATTTCCAGCACGCCTTTTTACCCTTGTTCTTCTGCTGCTGCTGCTTGCCATGCCTCTTGCTGTTACAATTAAAGCCCAGCAGAGCAACTTTGATGGAACTTCTCAAACTTTCTTGATTGAGAAGAACCAATTAATAGATGACCCAAAACAATTGGATGCTGAGAAAATAGGTAAAGGGCAAGATCCTGCTGGATATCATTTGGTGCATAGTGATGCTGAACAAGAGAGAAATAATGATGATAATAGGGTTTTACTCCAGGGAGAAAACCTGAATCTGTTGCAAGCCATGGGCACCTGTAACTTTTGGTGTTTGTTTCTTGCCATGGCATGTGGAATGGGTTCAGGACTTGCCACAGTGAATAACATTGGCCAAATTGGAGGAGCATTTGGTTACAAAAGCTTTGAGACAAGTACTTTAGTTTCTTTATGGAGCATTTGGAATTTTCTTGGTCGTTTTGGAACTGGTTATGTATCAGACTATTTCCTGCATACAAGAGGATGGGCAAGGCCAGTATTCATGGTCATCACTCTTGCAACCATGAGTATTGGTCATTTTGTTATTGCTTCTGGTATGCCTGGTGCTCTTTATGCTGGTTCAGTATTAGTGGGTGTATCTTATGGTTCACAATGGTCACTAATGCCCACAATCACTTCTGAGATATTTGGTGTACAGCATTTGGGCACCATATTCAACACCATTACCATGGCAAGTCCAGTTGGATCTTATATTTTCTCGGTGAGGGTGGTTGGCTACATTTATGATAAAGAAGCATCAGCAGACGGGAATAAATGCACAGGAACTCACTGCTTCATGGTATCTTTTCTCATTATGGCATCAGCTACCCTGTTGGGGTGTTTTGTTGCTTTGATATTGTTCCTCCGAACTAAAAGCTTCTATAACCAAGTTGTACTACGAAGACTGCAACATCCGGGTAGAGTGTAA 1671 0.453 MERIQSKWIATLASIWIQCSSGSLYTFSIFSSALKSSQGYDQSTLDTVSVVKDVGATAGVLSGFLYSAVAVPHRSRRSSSCFLRGPWVVIAVGAIQCFAGYFFLWLSVAGAIPRQPVPLMCLFMFLTAHAQTFFNTANVVTAVHNFPDFSGTVVGIMKGFLGLSGAILIQLYQAIFKGNPASYLLMLMLVTTVNPLLLMCLVRIYNTKEGDEKKHLNGFSLVALVVAGYLMALIILENILTLQFPARLFTLVLLLLLLAMPLAVTIKAQQSNFDGTSQTFLIEKNQLIDDPKQLDAEKIGKGQDPAGYHLVHSDAEQERNNDDNRVLLQGENLNLLQAMGTCNFWCLFLAMACGMGSGLATVNNIGQIGGAFGYKSFETSTLVSLWSIWNFLGRFGTGYVSDYFLHTRGWARPVFMVITLATMSIGHFVIASGMPGALYAGSVLVGVSYGSQWSLMPTITSEIFGVQHLGTIFNTITMASPVGSYIFSVRVVGYIYDKEASADGNKCTGTHCFMVSFLIMASATLLGCFVALILFLRTKSFYNQVVLRRLQHPGRV* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0532 556 CDD MFS_Mch1p_like 6 528 - -
Vvi17g0532 556 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 543 - -
Vvi17g0532 556 SUPERFAMILY MFS general substrate transporter 220 540 IPR036259 -
Vvi17g0532 556 Gene3D MFS general substrate transporter like domains 336 542 IPR036259 -
Vvi17g0532 556 Pfam Nodulin-like 7 266 IPR010658 -
Vvi17g0532 556 SUPERFAMILY MFS general substrate transporter 10 204 IPR036259 -
Vvi17g0532 556 Pfam Major Facilitator Superfamily 347 539 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0532 Vvi-Chr17 5956510 5958811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0532 1 552 Nodulin-like Gene Family AT1G74780 58.590 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0532 - - vvi:100250053 1091.64