Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0507 ATGGCTGCAAAGCTTCTGCATTCCTTAACAGATGATAACCCAGATTTGCAGAAGCAAATTGGGTGCATGGCTGGGATCTTTCAACTCTTTGATCATCACCATATCCTCACCGGAAGGCGCATCAGCCACAAGAGGCTTCTTCCAGGTAATTCCTACCTCAACAGCAGCCTGGAAACGAATTCTACTAATGTAGGCCACCGACATACTGCAGCAGGAAAAAATTCAAACAAAAGTGTGAATGAGAAACAAAAATTCTCCACAGAATCATCCAGAGTTTCATTCTCATCTTCGTCTTGTTCATCTTCTATGTCCTCTCTCGAATGTAACAAAACAGCTCAACCAGAACCTTGTTCCTTTGACCGAATCATTTTTCCTGAAACTCACTCAAGGGATCCAGCCATGAACCAGTTAAGTGCCTCTCCACAATTAGGGCGGCAATCGCTTGATCTTCGTGATTTGGTCAAGGATTCTATGTACAGAGAAGTACGAGGGCTGTCAGTTAAGACTACAACCAGAGAAGAAGCTGTGGGCCATGCCGTGAAGCCTAAAGACTCTCCAAGGCCTTCACAGCCATCCAAATCAATGGATGGATCTTATGGAGTTGGTACCAAAGGGAAGCAAAATGTGCCTGTTGATCTCAAGGAGTCTCTTAGAGTTCTTGCCAAGCTTCGAGAAGCACCTTGGTATTTCAATGAAGCTAGAGAACTTCCAAGATCATCATATGAAGCAAAAGATGGACCTTTGCCTTCAATTCCAAAAGATGCTCCTCGGTTTTCTTATGATGGGAGGGAGATAAACCGCTTATCCTTTGAATCACAAGATACCTCCAAAGGCACCCCAAAGCTGAAAGAACTACCAAGACTTTCATTGGACAGCAGAGAGGGTTCCATGCGGGGTTCGAACTTTGATTCAAGATCAAATTCCGTTTTGAGGAATTTGCAGAAGGGCAGTGCCAACTCTAAAGACAATGTCCCAAATTTAAAGCAAATATCAGAGTCTCAGAAACGGCCTCCTAGCGTTGTTGCTAAGTTGATGGGCTTGGAAGCTTTACCAGATTCCATATCAGTCCATGATAGTCAGATGGGGTTGATCAGAACCTGCCCAATCCAGGATTGTGATCCCTTCTCAAGGTCACCTAAAACACCTGATCCAAGTAGTAGGCCAATCCAGATGCCCTACTCCCCTAGAAGCTCATGGAAGGAACCAACTTCACCAAGGTGGAGAAATCCAGATTCAGTCATGAAACCTATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAGACAGCAGGATGGAAGTCGGGGCTCTCTAAAACCAGCTTCTAGGAATATAAAAGCTCCAGCAAGGGCACCAAATTCCTTCCCATCTGTGTATAGTGAGATTGAGAAAAGATTGAAAGATCTTGAATTTAAACAATCTGGAAAGGATCTAAGAGCTCTTAAACAAATATTAGAAGCAATGCAGGCAAAGGGACTCTTGGAGACCAGAAGAGAAGAGCAACCTTCCAACTTTGGAACTAAAAGAGATGAGCCAAAATATACCAGCTTTGATCAGAAGGTAAGACTGGCAAGCCAACGAAAAACTCAACATGATACTGTTTGTGCTGCCACTGCTGGGGGGGCTAATTCTCGAAGGAGTTTTGATTCCCCAATTGTGATCATGAAACCAGCCAAACTAGTTGAGAAATCTAGTATTCCTGCTTCCTCCGTAATTTCAATTGATGGTTTTTCCAGTTTCCATAAGCCTCAGGGTGGCAACTTTGCAGATAACAGAAAGGATTCAGTTAATAGCCAAACAGCTAAAGTTTTTACTCCTAAAAATAGTAGCAGAGATCATGTTACTAGTTCCATTGATAAGAGAAGCAATGTCAGAAACTCAAGAGCAGCACAAACTCCAACAAGGCCTCAACAGTTGCCTAAAGAAAATACCTCAAGCTTGGTAAAGAGCTCAGGATCTGTAAGCCCAAGACTACAGCAAAAGAAGCTCGAGTTAGAGAAGCGATCTCGACTGCCCAGCACTTCATCTGAATTGGGCAAATCAAGAAGGCAATCCCACAAGATGCCAACAGAATCAAGTTCGCCAGGAGGAAAATGCAGACCAAAATCTCCCAACTTGCAGCAAAGTGATGACCAACTGAGTGAGATAAGTAGCGAATCAAGAAACTTGAGTTACCAGGGAGATGACATTTCTGTGCATTCAGACAGCAACATGGAAGTCACCAGTACTGAACACTCTACTGAGATCAATGGCAGCCGGAGTCCATCCATGAAGGCTGCCAATTGTCCAACTTCTGGCTTATTAAAGAAAAAATCAACTTCAAGGTTGGCCGAAGATGTGTCATTGGCAGAACTTGCTACAATTGCCCCCGAGCAGCCCAGCCCTGTCTCTGTTCTTGATGCTTCAGTGTACATAGATGATGCACCATCTCCTGTGAAGCAGACACCAACTGCTCTGAAAGATAATGGGAGTTGGAATTCCAGCAACAATCATGATGAAGAGCAATGGAAGCTGAAGGATGATATCTTATCTAACAGCACAGGATCAGGCGTTACCTCTGAGATCAACCGCAAAAAATTACAAAATATTGAACATTTGGTCCAGAAGCTTAAACAACTAAACTCCACTCACGATGAAGCCAGCACAGATTACATTGCATCACTCTGTGAGAACACAAACCCAGACCACAGATACATTTCTGAGATATTGTTAGCTTCAGGTCTCCTCCTCAGAGACCTTGACTCCAGCCTCACAACCTATCAGTTCCACCCGTCAGGGCACCCAATCAACCCTGAGTTATTCTTTGTTCTGGAGCAAACCAAGGGTAGCACTTTGATCTGCAAAGAAGGCTGCTCTGGAACAGTTTCCAATCTGAAGCCTGACCAGGGAAAATTTCACCGTAAACTTATATTTGATGCTGTTAATGAGATTCTTGTGGGAAAGTTAGCTCTGGCAGGGCCCTCTCCTGAACCATGGATAAAGCCTGATAAACTGGCAAGGAAGACATTGAGTGCACAAAAGCTTCTAAAAGAATTGTGTTCAGAGATAGAGCAGCTTCAAGCCATCAAATCAGAGTGCATCATAGAGGAGAAGGAGGATGATTTTAAAAGCATCTTATGGAAGGATGTAATGCATGGATCCGAGAGTTGGACAGATTTTTGTGGTGAGATTTCTGGGGTAGTTTTGGATGTTGAACGTTTGATCTTCAAGGATTTGGTTGATGAGATTGTCATGGGTGAGTCGACTAGTGCACGAGCCAATCCTGGTAGGCGTTGCAGGCGGCTGTTTGCAAAGTAG 3300 0.4394 MAAKLLHSLTDDNPDLQKQIGCMAGIFQLFDHHHILTGRRISHKRLLPGNSYLNSSLETNSTNVGHRHTAAGKNSNKSVNEKQKFSTESSRVSFSSSSCSSSMSSLECNKTAQPEPCSFDRIIFPETHSRDPAMNQLSASPQLGRQSLDLRDLVKDSMYREVRGLSVKTTTREEAVGHAVKPKDSPRPSQPSKSMDGSYGVGTKGKQNVPVDLKESLRVLAKLREAPWYFNEARELPRSSYEAKDGPLPSIPKDAPRFSYDGREINRLSFESQDTSKGTPKLKELPRLSLDSREGSMRGSNFDSRSNSVLRNLQKGSANSKDNVPNLKQISESQKRPPSVVAKLMGLEALPDSISVHDSQMGLIRTCPIQDCDPFSRSPKTPDPSSRPIQMPYSPRSSWKEPTSPRWRNPDSVMKPISSSRFPIEPAPWRQQDGSRGSLKPASRNIKAPARAPNSFPSVYSEIEKRLKDLEFKQSGKDLRALKQILEAMQAKGLLETRREEQPSNFGTKRDEPKYTSFDQKVRLASQRKTQHDTVCAATAGGANSRRSFDSPIVIMKPAKLVEKSSIPASSVISIDGFSSFHKPQGGNFADNRKDSVNSQTAKVFTPKNSSRDHVTSSIDKRSNVRNSRAAQTPTRPQQLPKENTSSLVKSSGSVSPRLQQKKLELEKRSRLPSTSSELGKSRRQSHKMPTESSSPGGKCRPKSPNLQQSDDQLSEISSESRNLSYQGDDISVHSDSNMEVTSTEHSTEINGSRSPSMKAANCPTSGLLKKKSTSRLAEDVSLAELATIAPEQPSPVSVLDASVYIDDAPSPVKQTPTALKDNGSWNSSNNHDEEQWKLKDDILSNSTGSGVTSEINRKKLQNIEHLVQKLKQLNSTHDEASTDYIASLCENTNPDHRYISEILLASGLLLRDLDSSLTTYQFHPSGHPINPELFFVLEQTKGSTLICKEGCSGTVSNLKPDQGKFHRKLIFDAVNEILVGKLALAGPSPEPWIKPDKLARKTLSAQKLLKELCSEIEQLQAIKSECIIEEKEDDFKSILWKDVMHGSESWTDFCGEISGVVLDVERLIFKDLVDEIVMGESTSARANPGRRCRRLFAK* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 689 772 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 58 112 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 390 405 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 369 455 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 581 773 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 165 181 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 277 291 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 268 338 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 58 113 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 810 833 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 294 336 - -
Vvi17g0507 1099 Pfam Domain of unknown function (DUF4378) 896 1076 IPR025486 -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 591 613 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 240 259 - -
Vvi17g0507 1099 Pfam DUF761-associated sequence motif 335 353 IPR032795 -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 621 659 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 494 548 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 816 832 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 520 538 - -
Vvi17g0507 1099 PANTHER LONGIFOLIA PROTEIN 1 1097 IPR033334 GO:0051513
Vvi17g0507 1099 Coils Coil 857 884 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 165 207 - -
Vvi17g0507 1099 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0507 Vvi-Chr17 5700655 5706409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0507 148 1098 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 50.103 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0507 - - vvi:100253543 2142.47