Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0497 ATGTCGTCGGAAAACTACTTTTCGTTCGTTCCGGGAACTGGGTCCTCGCCAGTTCTAAGTTTGGAACTGTTCTTGTGTGTGGTTTTGTTCGTTGGCGTCTTTGGTTTCTGGCTTGTGCCTGGTGGTTTAGCTTGGGCTATGTCCAAGGCTAAAGCACGTAGCGCCATTCCTGGCCCTTCTGGGTTACCTCTGATAGGTCTTGTTTTCGCCTTCACTGGCTCTCTGACTCATAGGGTTCTGGCCAAGCTGGCTCGTGTTTCTGAAGCTGCGCCATTGATGGCTTTTTCGGTTGGCTTTACTCGTTTCATTATCTCCAGCCAACCGGAAACAGCCAAGGAGATTCTGAACAGTTCGGCGTTCGCGGACCGACCAGTGAAGGAGTCGGCTTATGAGCTTTTATTCCACCGAGCAATGGGTTTTGCTCCGTTCGGGGTGTACTGGAGAAATCTGAGGAGGATTTCGGCCACCCATTTGTTCAGTCCGAGGAGAATCGCTGGTTTCGGGGAGTTTCGGAGGACTATTGGGTTGAAAATGGTGGATGAGATTAGGGTTTTGATGGAGAAGAAAGGTGAGGTGAAGGTGAAGAAAGTGTTGCATTTTGGGTCTTTGAACAATGTGATGATGAGCGTGTTTGGAAGGAGCTACGACTTTGGAAAAGGTGTTTCTGGTGATGCGGTTGAGCTTGAGAGCCTGGTGAGTGAAGGGTACGAACTGCTTGGTATATTCAACTGGAGTGACCACTTACCGCTTCTCGGGTGGTTGGACTTGCAAGGAGTGAGAAAGAGATGCAAAAAGTTGGTTTCGAAGGTGAACGTTTTTGTTTCCAGGATCATAGATGAGCACAGGCTCAGGAGGGTTGGTGATGGAGAAGTGGGTCGTGATGGTGATGACAGTTCAGGCGATTTTGTTGACGTCTTACTCGATTTGGAAAAGGAAAGCAGGCTCAGCGACTCTGATATGATTGCTGTTTTATGGGAAATGATCTTTAGAGGGACTGACACGGTGGCAATTCTGTTGGAGTGGATTCTTGCAAGAATGGTTTTACACCCCGATATTCAATCCAAAGCCCAATCTGAAATAGATGCAGTGGTTGGAGCCACCCGACTGGTGTCTGATTCAGACATTCATAAACTCCCTTATCTCCATGCCATAGTAAAGGAAACTCTCCGCATGCATCCACCTGGCCCGCTCCTTTCCTGGGCACGCCTTTCCATTCATGATACCCACATTGGTTCGCACTTCATCCCTGCAGGCACCACAGCTATGGTGAATATGTGGGCAATAACCCATGATGATGCTGTGTGGGATGAGCCTAAGGAATTCAAGCCAAGTCGCTTTATGGAGGAGGATGTGAGCATTTTGGGTTCTGATCTTAGGTTGGCACCATTTGGCTCTGGAAGAAGGGTTTGTCCTGGGAAAGCAATGGGTTTAGCAACTGTGCAACTGTGGTTGGCTCAATTGCTCCAAAACTTCAAATGGGTTGCTTGTGACTCTGGTGTGGACTTGTCTGAGTGCCTCAAGCTCTCAATGGAGATGAAACAGTCCTTGGTTTGCAAGGCTGTTCCTAGGTTCTCTTGA 1578 0.4854 MSSENYFSFVPGTGSSPVLSLELFLCVVLFVGVFGFWLVPGGLAWAMSKAKARSAIPGPSGLPLIGLVFAFTGSLTHRVLAKLARVSEAAPLMAFSVGFTRFIISSQPETAKEILNSSAFADRPVKESAYELLFHRAMGFAPFGVYWRNLRRISATHLFSPRRIAGFGEFRRTIGLKMVDEIRVLMEKKGEVKVKKVLHFGSLNNVMMSVFGRSYDFGKGVSGDAVELESLVSEGYELLGIFNWSDHLPLLGWLDLQGVRKRCKKLVSKVNVFVSRIIDEHRLRRVGDGEVGRDGDDSSGDFVDVLLDLEKESRLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKAQSEIDAVVGATRLVSDSDIHKLPYLHAIVKETLRMHPPGPLLSWARLSIHDTHIGSHFIPAGTTAMVNMWAITHDDAVWDEPKEFKPSRFMEEDVSILGSDLRLAPFGSGRRVCPGKAMGLATVQLWLAQLLQNFKWVACDSGVDLSECLKLSMEMKQSLVCKAVPRFS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0497 525 PANTHER CYTOCHROME P450 78A7-RELATED 20 523 - -
Vvi17g0497 525 SUPERFAMILY Cytochrome P450 56 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 CDD CYP78 89 516 - -
Vvi17g0497 525 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vvi17g0497 525 Gene3D Cytochrome P450 44 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 FunFam Cytochrome P450 78A5 48 523 - -
Vvi17g0497 525 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0497 525 Pfam Cytochrome P450 57 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0497 Vvi-Chr17 5600529 5602574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0497 1 523 Cytochrome P450 AT1G74110 67.778 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0497 K20619 - vvi:100253660 967.992