Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0491 ATGAAGATTGCCCTTCTGCAGCATCCAAATCTCAACAATGTTGCCCAAGTTTACAGCTTTGTGTACAAGCCGCTAGTCCCATACAAATCCATTAATGACACTGGTATATTTTATGGCATAAAGTACTATAATGACATTTTAAGGGAAGCTGGACCCCAGAGGGGAACGTGCAGTCAGAGTTGA 183 0.4208 MKIALLQHPNLNNVAQVYSFVYKPLVPYKSINDTGIFYGIKYYNDILREAGPQRGTCSQS* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0491 60 PANTHER PROTEIN COBRA 5 55 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0491 Vvi-Chr17 5528299 5528564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0491 5 52 COBRA Gene Family AT3G02210 64.583 4.39e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0491 - - egr:104420953 89.7373