Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0474 ATGGCTACAGTTTCCTCTTCCCAAAAACCTCTTGATGATGAGGAAGACGATGGTAAAGAGAGGACGTGCAAAAGGTACAGTGAGATCATTTCAACCCTTCCAAAGGAAAAAGGCTGGACAACTGAGCATATGTATCAGTACCAGGGCTTTTGGTACCATTCCGTAGTTGGCTTACAAGGAATCATGTGGGTGGAAGAACACTTTAAGCCACGACATGAAGACCTTCTCTTAGTCTCTGCTCCAAAATCGGGCACAACATGGTTTAAATCTCTCATGTTTGCTATTATGAATCGAGGCCAGTATGATTGTTCAACACATCCTTTGCTCACCACCAGCCCTCATGAGCTTGTTCCTTTCTCGGAAATATTCTTTCACCTAAACATCCCATTCCCAAATCCAGATACACTTTCTCCTCCTCAAATCTTCCATACCCACCTCCCTTTTACTTCATTATCTCAGTCTGTCCTAGATTCTCAGTGTCGGATCGTATATGTTTGTCGAAATCCAAAAGACACGTTTGTCTCTTTGTTTCACTTCCTGCAGAAGAAGGAAGAGGAAAATCCAAGAGAACCACTTTCCTTTGAAGAGGCATTTGAGCAATTTTGCAAAGGAGTTTCTGTGTATGGCCCCTTCTGGGATCACGTATTGGGGTACTGGAAGGCAAGCTTAGAGTGGCCTGAGAGGGTCCTGTTCTTGAAATACGAGGATATGAAGGTGGATTCTTCATTCCATCTCAAGAGGTTAGCAGAGTTCATGGGCTATGCCTTCTCTTTAGAGGAAGAAAAACAAGGCTTGGTGAAAGAAATTTTAAAGTTGTGTAGTTTCGAGAATCAAAGTAATTTGAGAGTTAATAAGACAGGAAGATTTCGAGTTGGGCACATGAGCATGGAGAACAATCCATTCTTTAGGAAAGGCGAGGTTGGAGACTGGAAGAATCATCTAACAGCTGAGATGGCTGAGCGCCTTGACAGGATCACAGGGCAAAAGTTGAACGGTTATGATTTGAGATTCCTGGATACCTTAGATAAAGTTCTATTTTTGTTTTCAGACTTCCACTACCCATTTTACTCTGTTTTCCACCATCATCCTTTATCCAGTTGCTTATCTTACCACCCATTCGCCAATCCCGCATCCCCTCACGTCCATGCAACCCATGCGCGCTCCCCTCATGACATTCCTTTGCTCATCCCGTCCTGCATTTTCACTCCCAGGTTCATGCCATACTCACCGTCACCTTTCCTCTCTTTCTACACCACAATCATACCCACTAATGTTCCAAGTTGCATGTCCACTCGTTCCCATCACTACGCTCGTCTCGCCCTTCGTGCCATGAGTTTATCACCATCAACCCAGCCCATATTGTTCACCAAGCCCCAACCTCCATTCCATCTTAATCACCGCCACCAACTTCCGCCCACGAAACTACGCCTTTCCTTGACAACAATGGCGGCTGGTGCAACCCTCTTCATCATCCATTTCCTAACCTCTTCGAATCCCCAAGACATGACGCCGTTTCCGAATCCTTCCTACATCGCCGACGTCTGCGAGGACCTCTCTGTCTTCCCCCCGCCACAGTTCCCTTTTGATCATTCCTTCTCTCTCCACTCTCTCTCTCTACGTTCGAGATCAGCATATGCCGACCAAACCGCCTTGAAACAGCCCAATGAGCTCGTTCGGAGGAATGGTGGTCTCGGTGGTGACTACATCACCATGCGCCGGGCTGTTGAAAGCATCCCCCGAAACATATGGCAAGCCCAACCTCGTTCGCGCCCGGAGCATCTTGCAATCTGGGCCTGTCAACTTGTGCTCATGGGACTCCTTGAAGGATGCCGTGTTGGTGGAAGCCCACTTGGTGAGAGTTCTTTTTTTAGATAG 1875 0.4683 MATVSSSQKPLDDEEDDGKERTCKRYSEIISTLPKEKGWTTEHMYQYQGFWYHSVVGLQGIMWVEEHFKPRHEDLLLVSAPKSGTTWFKSLMFAIMNRGQYDCSTHPLLTTSPHELVPFSEIFFHLNIPFPNPDTLSPPQIFHTHLPFTSLSQSVLDSQCRIVYVCRNPKDTFVSLFHFLQKKEEENPREPLSFEEAFEQFCKGVSVYGPFWDHVLGYWKASLEWPERVLFLKYEDMKVDSSFHLKRLAEFMGYAFSLEEEKQGLVKEILKLCSFENQSNLRVNKTGRFRVGHMSMENNPFFRKGEVGDWKNHLTAEMAERLDRITGQKLNGYDLRFLDTLDKVLFLFSDFHYPFYSVFHHHPLSSCLSYHPFANPASPHVHATHARSPHDIPLLIPSCIFTPRFMPYSPSPFLSFYTTIIPTNVPSCMSTRSHHYARLALRAMSLSPSTQPILFTKPQPPFHLNHRHQLPPTKLRLSLTTMAAGATLFIIHFLTSSNPQDMTPFPNPSYIADVCEDLSVFPPPQFPFDHSFSLHSLSLRSRSAYADQTALKQPNELVRRNGGLGGDYITMRRAVESIPRNIWQAQPRSRPEHLAIWACQLVLMGLLEGCRVGGSPLGESSFFR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0474 624 Gene3D - 11 338 IPR027417 -
Vvi17g0474 624 MobiDBLite consensus disorder prediction 1 20 - -
Vvi17g0474 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 338 IPR027417 -
Vvi17g0474 624 PANTHER SULFOTRANSFERASE SULT 42 331 - -
Vvi17g0474 624 Pfam Sulfotransferase domain 73 332 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0474 Vvi-Chr17 5320630 5325215 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0474 470 620 Chloroplast and Mitochondria Gene Families AT3G27690 26.857 5.14e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0474 - K22312 vvi:100267913 721.85