Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g0416 | ATGATAGTTGAAGAAAGCCAAATAGAGCACTTCATAAATGAGATTGTGATTCTTTCACAAATCAATCATAGGAATATAGTTGGGCTCTTAGGTTGTTGCTTGGAGACAGAAGTTCCTTCATTAGTTTATGAGTACATTTCCAATGGAACCTTGTTCCAACTTATTCATAGTCAAGATACGGACTTCCCATTTTCATGGGAAATGCGGACTTTGGGTTACTTGGATCCAGAATATTTTCAAACAAGTCAATTTACTGAAAAAAGTGATGTATACAGTTTTGGAGTTGTTCTTGTCGAGCTTTTAACAGGACAAAAGCCAATTTGTTCAACAAGACCACAAGAAGAGAAAAATTTGGCAACACATTTCATTTTGTCATTACAAGAGTCTCGTCTATTTGATATTCTTGATTCTCGAGTTGTAAAGGAAGGAGGGAAAGAAGAGATCATGGCAGTTGCTTACCTTACATATCGATGCTTAAACTTGAATGGAAGGAAAATGCCTACAATGAAAGAGGTTATCACAGAATTAGAGCATATTAGAGTGTCTCCTCCATCTTTAAAGGTTGACCAAAATTTTGAAGAGAATGCATGCATCGAAATGGAAACATCAGGCCCCCTAGATAGTACTTCATCTTTCAGAAGGTCGTGTTTGAATTACAACAAAGCATCTTCCTCAGATGAGCAACCATTGTTATTTAACACATTATGA | 708 | 0.3616 | MIVEESQIEHFINEIVILSQINHRNIVGLLGCCLETEVPSLVYEYISNGTLFQLIHSQDTDFPFSWEMRTLGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGQKPICSTRPQEEKNLATHFILSLQESRLFDILDSRVVKEGGKEEIMAVAYLTYRCLNLNGRKMPTMKEVITELEHIRVSPPSLKVDQNFEENACIEMETSGPLDSTSSFRRSCLNYNKASSSDEQPLLFNTL* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g0416 | 235 | Pfam | Protein tyrosine and serine/threonine kinase | 72 | 172 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi17g0416 | 235 | Pfam | Protein tyrosine and serine/threonine kinase | 4 | 63 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi17g0416 | 235 | ProSiteProfiles | Protein kinase domain profile. | 1 | 181 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0416 | 235 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 69 | 192 | IPR045274 | GO:0007166 | |
Vvi17g0416 | 235 | Gene3D | Transferase(Phosphotransferase) domain 1 | 50 | 201 | - | - | |
Vvi17g0416 | 235 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 49 | - | - | |
Vvi17g0416 | 235 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 189 | IPR011009 | - | |
Vvi17g0416 | 235 | FunFam | Protein kinase superfamily protein | 3 | 49 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g0416 | Vvi-Chr17 | 4591496 | 4592395 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g0416 | 4 | 195 | Receptor kinase-like Gene Family | AT3G25490 | 38.132 | 3.72e-47 | 159 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vvi17g0416 | PK_Tyr_Ser-Thr | 3.4e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g0416 | - | - | vvi:100259516 | 285.804 |