Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0406 ATGGCCTCCATCTCCAAAGCTTCTCTCCTCATATTCCTCTTCTTCTCTCTCCATTTCTTCCCTGTCATCTCCGTCGAGTTCCTAGTCGGTGATGACGACGGCTGGGCTCTTCCATCATCAAAGAGTGGAGAGCAAATGTACAATGAATGGGCATCCCATAACCGGTTCAAAGTCGGCGACACCGTTCATTTTAAGTATGAGAAGGATTCAGTAATGGTAGTGACGGAAGCTGAGTACAACAAGTGCCATTCCGCCCATCCCATTCTTTTCTCCAACAATGGCGATACCATCTTCTCACTGGATCGTCCTGGTTTGTTTTACTTCATCAGTGGGGTTGCAGGGCACTGCGAGCGAGGGCAGAAGATGATCATCAAGGTTTTGGAGCCGCCGAGCCCGCCTTCGGTCCCCAAACAGAATGGGACGTCAAATTCGTCGAATTCGTCTCATAGCAGTGGTGCAGTTGACATGGCTGCTGCCATTTCTGCTTCAACAGTTGGGCTGTTCATCATCTCTTTCTTTGGGGTTCTTCTGTTCTAA 537 0.4916 MASISKASLLIFLFFSLHFFPVISVEFLVGDDDGWALPSSKSGEQMYNEWASHNRFKVGDTVHFKYEKDSVMVVTEAEYNKCHSAHPILFSNNGDTIFSLDRPGLFYFISGVAGHCERGQKMIIKVLEPPSPPSVPKQNGTSNSSNSSHSSGAVDMAAAISASTVGLFIISFFGVLLF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0406 178 FunFam Early nodulin-like protein 1 24 131 - -
Vvi17g0406 178 Gene3D - 24 130 IPR008972 -
Vvi17g0406 178 MobiDBLite consensus disorder prediction 128 148 - -
Vvi17g0406 178 ProSiteProfiles Phytocyanin domain profile. 25 128 IPR003245 GO:0009055
Vvi17g0406 178 Pfam Plastocyanin-like domain 44 120 IPR003245 GO:0009055
Vvi17g0406 178 PANTHER BLUE COPPER PROTEIN 25 145 IPR039391 GO:0009055
Vvi17g0406 178 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Vvi17g0406 178 CDD OsENODL1_like 26 127 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0406 Vvi-Chr17 4521710 4522361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0406 1 127 Phytocyanin Superfamily AT3G18590 59.055 1.69e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0406 - - vvi:100264540 330.487