Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0370 ATGTCACTCGTATTTTGCTTGTGCTTAATGTTTTTTGATTCTACTATAAATCTTATAAGAATTTGTTCTTTTATAAGTGAATTTATGACATTAGTTCATCAATGCAGAGAAACGCGATACGTATTCATTTGCAAAACATTGGTTGATGTAGCTTTATTCATTATACTCTTCCACCCTTGTCCTATCACAAAACCATATCCACCCTACAATAATGTGTGGCAATATAATATCTATATATATGGGTGGCCTTCTATCATCACTTCTCATATCTCAAACTCTACTTTCCCATTATCAGTACCAATGGCTCTTTTCACCGTTGCTATTCTCCTAGTCATCCTTGGAGCCATGTGGGTCACTTTATCACACCTAAAACTCCGAGCAGGCTACAGGAAACTGCCACCGGGGCCTTGGGGTTTACCAATTATTGGTAGCCTCTACATGTTGGGGAGCCTGCCTCACCGAAACCTTAGCCGCTTGGCCAAGAAGTATGGGCCCATCATGTTTATGCGACTGGGGTGTGTTCCAACTATCGTAGTGTCGTCGCCTGAAGCCGCCAAGCTAGTCATGAAAACCCATGATGTTGTGTTTGCTAGCCGTCCAAAACTCCAGGCCTATGAATACCTGAGCTACGGGGCTAAGGGCATTGCATTTACGGAGTATGGTCCGTACTGGCGGCATGTGAGAAAATTGTGTGCATTGCATCTTTTTAGCAGTGCAAAAATCAATTCCTTTGCCTCAGTGAGGAAGGCGGAGGTGGGGTTGTTAGTGAAGTCAGTTAAGGAAATGGCGAGTGCTGGAGAGGTGGTGGATATCAGCGCAAAGGTTGCTGGGGTCGTCGAAGATATGGCGTATCGAATGGTTTTTGGACATAACAAGGACCGGATTTTTGACTTGAAAACACTAATTCGAGAGGCCACTAGATTGGCAGGAACTTTTAATCTTGCAGACTATGTGCCATTCCTTGGCCCTCTTGACCTTCAGGGATTGACTCAACTCCTTCGCACAAATAATGAGGCCATAGATGAAGTCTTGGATAAGATCATTGACAAGCATATACAAGATGTTAGCAAAGATGAAGTAAATCATATGAATTTCATTGATGTCGTGCTATCACTAATGAATAAATCAAACAATTTTGAGGATGATCCGTTATATGCTATTGATCGACAGAATGCCAAAGCAATCATCTTAGATATACTTGTGGGTGGAATTGATTCTTCAATTACTTCAATTGAGTGGGTTATCTCCGAACTACTAAGGCATCCAAGGGTGATGAGACGACTTCAAGAAGAGTTAAAGAATGTAGTTGGCATGTGTCGAATGGTGGAAGAATCTGACTTGGAAAATTTGGGCTACTTGAATATGGTGGTGAAAGAAACCTTAAGGCTGCATCCTATTGGACCATTTCTAGTTCCACGTGAGTCTATAGAAGATATTGTAATTAATGGACATTACATACCTAAGAAGTCAAGAATTCTGATAAATACGTGGACAATTGGAAGAGACCCTAATGTTTGGTCTAACAATGTTGAAGAATTCTTTCCTGAGAGGTTCGTTGAAAACAATATTGACCTTCAAGGGCATGATTTTGAACTTACTCCATTTGGATCAGGTCGTCGAGGGTGCCCTGGAATTCAATTGGGTCTAATAACTGTTCAACTCGTAGTATCTCAATTGGTGCATTGTTTTAATTGGAAGTTACCAAATGACACACCACCAAGTGAATTGAACATGAAAGAGAAATTTGGTTTGACAATGCCGAGGGTTGATCACCTGTTAGCCACGCCAACTTATCGATTACTTGCTTAA 1809 0.4118 MSLVFCLCLMFFDSTINLIRICSFISEFMTLVHQCRETRYVFICKTLVDVALFIILFHPCPITKPYPPYNNVWQYNIYIYGWPSIITSHISNSTFPLSVPMALFTVAILLVILGAMWVTLSHLKLRAGYRKLPPGPWGLPIIGSLYMLGSLPHRNLSRLAKKYGPIMFMRLGCVPTIVVSSPEAAKLVMKTHDVVFASRPKLQAYEYLSYGAKGIAFTEYGPYWRHVRKLCALHLFSSAKINSFASVRKAEVGLLVKSVKEMASAGEVVDISAKVAGVVEDMAYRMVFGHNKDRIFDLKTLIREATRLAGTFNLADYVPFLGPLDLQGLTQLLRTNNEAIDEVLDKIIDKHIQDVSKDEVNHMNFIDVVLSLMNKSNNFEDDPLYAIDRQNAKAIILDILVGGIDSSITSIEWVISELLRHPRVMRRLQEELKNVVGMCRMVEESDLENLGYLNMVVKETLRLHPIGPFLVPRESIEDIVINGHYIPKKSRILINTWTIGRDPNVWSNNVEEFFPERFVENNIDLQGHDFELTPFGSGRRGCPGIQLGLITVQLVVSQLVHCFNWKLPNDTPPSELNMKEKFGLTMPRVDHLLATPTYRLLA* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0370 602 FunFam Cytochrome P450 83B1 120 595 - -
Vvi17g0370 602 Pfam Cytochrome P450 133 588 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 Gene3D Cytochrome P450 123 594 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 CDD CYP71-like 162 592 - -
Vvi17g0370 602 PRINTS E-class P450 group I signature 411 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 532 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 454 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 160 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 391 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 542 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS E-class P450 group I signature 184 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PANTHER CYTOCHROME P450 93A3-LIKE 106 600 - -
Vvi17g0370 602 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 535 544 IPR017972 GO:0005506|GO:0016705
Vvi17g0370 602 PRINTS P450 superfamily signature 402 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 PRINTS P450 superfamily signature 533 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0370 602 SUPERFAMILY Cytochrome P450 133 599 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0370 Vvi-Chr17 3892972 3898796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0370 140 601 Monolignol Biosynthesis Gene Families AT4G36220 40.252 7.17e-128 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0370 - - vvi:104882340 998.423