Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0369 ATGATGATTACTTTCAATGTCTTCTTTAATGTGGTCCATATTTGTACGTTACTTTCCTATTGCTGGAGAGGTGGTGGATATCAGCGCAATGGTAGCTGGGGTTGTCGAAGATATGGCGTATCGAATGTTTTTGGACGTAACAAGGTCCAGATTATTGACTTGAAAACACTAATTCGAGAGTTCACTAGGTTGGCAGGAACTTTTAATCTTGCAGACTATGTGCCATTCCTAGGCCCTCTTGACCTTCAGGGACCGACTCAACTCCTTCGCACAAATAGTGAGGCTATAGATGAATTCTTGGAGAAGATAATTGATAAGCATATACAAGATGTTAGCAAAGATGAAGTAAATCATATGAATTTCATTGATGTTGTGCTATCACTAATGAATAAGTCAAACAATTATGAGGATGAGTCGTTATATGCGATTGATCGAAAAAATGTCAAAGCAATCATCTTGGATGCACTTGCGGGTGGAACTGACACTTCAATTACTTCAATTGAGTGGATTCTCTCTGAACTACTAAGGCATCCAAGAGTGATGAGACAACTTCAAGAAGAGTTAAAGAATGTAGTTGGCATGCGTCGAATGGTGGAAGAGTCTGACTTGGAAAATTTGGACTACTTGAATATGGTGGTGAAAGAAACCTTAAGGCTGCATCCTACTACACCACTTCTAATTCCACATGAGTCTATGGAAGATATTGTAATTAATGGATATTACATACCTAAGAAGTTAAGAATTCTGATAAATGCGTGGACAATTAGAAGAGATCCTAATGTTTGGTCTAACAATTCACTAAAAGAAATGGCGGCAGCAGGAAACGTGGTGGATATTAGTACAAGGGTTGCCGAGGTCATCGAAGATATGGCGTACCGGATGGTTTTTGGACACGACAAGGATGAGATGATTGACCTGAAAACCCTAATTGGAGAGGCCACCAGCTTGGCTGGAACTTTCAATATTGCAGATTACTTGCCCTTCTTAGGGTCATTTGACCTTCAGGGATTGACTCGACGCTTCCAGGCAGCCAGTGAAGCTATAGATGAAGTCTTGGAGAAAATAATTGACAAGCATACAAAAGATGCTAGGGATGGAGTGAATCATATGAATTTCATGGACATCATGCTATCACTGATGAGTAAGTCCAATGATTTTAAGGATGAGCCTTTGTACGCCATTGATCGAACAAATGTCAAAGCAATCATATTGGACATCCTTGTCGGTGGAATCGACTCTTCGCTTATTTCCGTCGACTGGGCTCTCGCAGAACTACTACGACATCCAAGGGTGATGAAAAAGGTTCAAGAAGAGTTGAAGAATGTCGTTGGCATGGGTCGAACAGTAGAAGAGAGTGATTTGAAAAGTTTAATTTACATGAATATGGTGTTGAAGGAAGCCTTGAGACTACACCCAGTCGGACCTTTCTTGATCCCACGTGAGTCTGTAGAGCATAGCACAATCAATGAGCATTACATACCTAAGAAAGCAAGAATTCTCATAAATACATGGGCCATTGGAAGAGACCCTAACGCTTGGTCCAATAATGCAGAGGAATTCTTTCCTGAGAGGTTCATTGATAACAATATAGATCTTTATGGACATGATTTTGAGCTTATTCCATTTGGATCAGGCCGGCGAAGGTGTCCTGGAATTCAGCTAGTCATTCTTGGAGCCTTATGGATCACCTTATCACAGCTAAAACAACTACGAGCAAGCCACCAGAAACTGCCACCCGGTCCCTGGGGGTTACCAGTTATTGGTTGCCTCCATATGCTGGGAAACCTTCCTCACCGCAACCTCACCCGGTTAGCCAAGAAGTATGGTCCCATCATGTATATGCGACTGGGGTGTGTTCCAACTGTCATAGTCTCATCGGCCCAAGCCACCAAGCTATTCCTCAAAACCCATGATGTTGTGTTTGCCAGCCGGCCTAAGCTCCAAGCCTTCGAGCACCTGACCTACGGGACTAAGGGCATTGCCTTTAGCGAGTATGGTCCTTACTGGCGCAATGGGTTAGTTCAACGTTTCAAGGCAATTAACAAGGCTGCAGATGAAGTCTTAGAGAAAATAATTGATAGACGTATACAAGATGGTGGCAAAGATCATAACCATTCCAATTTCATTGACATCATGTTATCCTTGATGAGTAACTTCAGTAATCTTCGTAGTGAGTCTTCGTACATCATTGATCGGACAAATGTGAAAGCAATTTTATTGGACATGCTTGTGGGTGGTATCGACTCTTCAAGCACTACGATTGAATGGGTTTTCTCAGAACTCCTACGACATCCTAGAGTAATGAGACAACTTCAACATGAACTACAAAATGTAGTTAAAATGGATCGCATGGTAGATGAAAGTGATTTGGAAAATTTAGTATACTTGAATATGGTGGTCAAAGAGGTCCTGAGACTACACCCAATTGGACCATTTTTAGTCCCACATGCGTCCACGGAGGACATTACAATTGAAGGACATTTCATACCCAAAAGGTCAACAATTCTTATAAATACATGGGCTATTGGAAGAGATCCTAATTTTTGGTCTGACAATGTTGATGAATTTTTACCGGAGAGGTTTATTAACAGCAATATAGACCTCCAAGGACGTGACTTTGAGCTTATTCCATTTGGATCTGGTCGTCGAGGATGTCCTGGGATACAACTAGGTCTGAGAACTGTTCGACTTGTGTTAGCTCAATTGCTGCATTGTTTCAACTGGGAGTTACCAAACGATATGTCATCAGATGACTTGGATATGAGCGAAAAATTTGGTTTAACAATGCCAAGGAATGGTGTCTCTCTGAATGTGAATAATAATTTTCTCTATGTTTATCTCTGCATGTTTTTTGAATTGTGTAATAGCTTTTCTCACACTAGATCAGTTGATGGATTAGGGTTAATTCCATTTTTTTTCCAACAAATGATGTCATTTTGCTCTTGCCTAAGGTTTGAAAGTTGA 2964 0.4103 MMITFNVFFNVVHICTLLSYCWRGGGYQRNGSWGCRRYGVSNVFGRNKVQIIDLKTLIREFTRLAGTFNLADYVPFLGPLDLQGPTQLLRTNSEAIDEFLEKIIDKHIQDVSKDEVNHMNFIDVVLSLMNKSNNYEDESLYAIDRKNVKAIILDALAGGTDTSITSIEWILSELLRHPRVMRQLQEELKNVVGMRRMVEESDLENLDYLNMVVKETLRLHPTTPLLIPHESMEDIVINGYYIPKKLRILINAWTIRRDPNVWSNNSLKEMAAAGNVVDISTRVAEVIEDMAYRMVFGHDKDEMIDLKTLIGEATSLAGTFNIADYLPFLGSFDLQGLTRRFQAASEAIDEVLEKIIDKHTKDARDGVNHMNFMDIMLSLMSKSNDFKDEPLYAIDRTNVKAIILDILVGGIDSSLISVDWALAELLRHPRVMKKVQEELKNVVGMGRTVEESDLKSLIYMNMVLKEALRLHPVGPFLIPRESVEHSTINEHYIPKKARILINTWAIGRDPNAWSNNAEEFFPERFIDNNIDLYGHDFELIPFGSGRRRCPGIQLVILGALWITLSQLKQLRASHQKLPPGPWGLPVIGCLHMLGNLPHRNLTRLAKKYGPIMYMRLGCVPTVIVSSAQATKLFLKTHDVVFASRPKLQAFEHLTYGTKGIAFSEYGPYWRNGLVQRFKAINKAADEVLEKIIDRRIQDGGKDHNHSNFIDIMLSLMSNFSNLRSESSYIIDRTNVKAILLDMLVGGIDSSSTTIEWVFSELLRHPRVMRQLQHELQNVVKMDRMVDESDLENLVYLNMVVKEVLRLHPIGPFLVPHASTEDITIEGHFIPKRSTILINTWAIGRDPNFWSDNVDEFLPERFINSNIDLQGRDFELIPFGSGRRGCPGIQLGLRTVRLVLAQLLHCFNWELPNDMSSDDLDMSEKFGLTMPRNGVSLNVNNNFLYVYLCMFFELCNSFSHTRSVDGLGLIPFFFQQMMSFCSCLRFES* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0369 987 Coils Coil 334 354 - -
Vvi17g0369 987 Gene3D Cytochrome P450 569 671 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 FunFam Uncharacterized protein 649 938 - -
Vvi17g0369 987 FunFam Uncharacterized protein 266 582 - -
Vvi17g0369 987 SUPERFAMILY Cytochrome P450 268 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS P450 superfamily signature 876 885 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS P450 superfamily signature 745 762 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS P450 superfamily signature 798 809 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Gene3D Cytochrome P450 37 265 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Gene3D Cytochrome P450 266 567 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Gene3D Cytochrome P450 672 940 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PANTHER CYTOCHROME P450 93A3-LIKE 266 557 - -
Vvi17g0369 987 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 542 551 IPR017972 GO:0005506|GO:0016705
Vvi17g0369 987 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 878 887 IPR017972 GO:0005506|GO:0016705
Vvi17g0369 987 SUPERFAMILY Cytochrome P450 578 935 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 SUPERFAMILY Cytochrome P450 51 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS E-class P450 group I signature 875 885 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS E-class P450 group I signature 418 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS E-class P450 group I signature 398 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS E-class P450 group I signature 797 815 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 PRINTS E-class P450 group I signature 885 908 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Pfam Cytochrome P450 52 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Pfam Cytochrome P450 578 671 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Pfam Cytochrome P450 267 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0369 987 Pfam Cytochrome P450 675 935 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0369 Vvi-Chr17 3846664 3879071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0369 554 929 Cytochrome P450 AT3G26180 37.135 1.54e-77 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0369 - - vvi:100262749 576.63