Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0367 ATGAGGAAGGAGGAGCTGGGGGTGTTGGTGCAGTCACTGAAACAAATGGCAGCGGCTCGGGAAGTGGTGAATATTAGTAAAAAGGTAGGTGAACTAATTGAAGACATGACGCATAGAATGCTATTTGGGCGCTGTAAGGATTATCAGAGGGCTGACTTGAAGGCGCTTGTGCAAGAAACATTGATCTTGGTAGGAGCTTTCAATATAGCAGATTATGTGCCTTTTCTGGGGGCCCTCGATCTTCAGGGTTTGAAAAGGCGTATGAAGGCAATTAGTGGAGCTGTTGACCATATTTTAGAAAAGGTCATTGATGAGCATAAACAAGATGCTAGCGAAAATCAAGGAAACCATAAAGATTTTGTTGATGTGATGCTATCACTGATGAACGAGATGAAAAACTTTCATCAAGAGCCATCATATTTAATTGAACAAGAAAATATTAAAGGAATTGTATGGGACATAATTATTGGTGCAATTGACACTTCAGCTACCACCATTGAATGGTTACTTTCTGAATTGTTTAGACATCCAAGAGTTATGAGGCAACTTCAAGAAGAATTAGAGAATGTGATTGGAATGGAACGAATGGTAGAAGAGGTTGATTTGGCAAATCTAGTTTATTTAGACATGGTATTGAAAGAGGGTTTAAGACTACATCCTGCTGGACCATTGCTTCTCCCACATGAGTCCATCGAGGATATTACTCTAAATGGATATTACATACCTAAGAAGTCACGAATTATCATCAATGCATGGGCAATTGGAAGAGATCCTAATATATGGTCCAATAATGTTGAAGACTTTTTTCCTGAGAGGTTCATTGGTAGCAATATAGATTTTCAAGGGAAGGATTTTCAGTTCATTCCATTTGGATCAGGTCGTCGAAAATGTCCTGGAATGCAATTAGGTCTAATAAACGTTCGGCTTGTGTTAGCTCAATTAGTACATTGTTTTGATTGGAAACTACCTAATGGCATGTTACCTAGTGAGTTGGATATGAGCGAGGAATTTGGTTTGGCATTGCCAAGGGCCACTCACTTACATGCTCTTCCTACTTATCGACTTCTTCCCAAAGTGAACATGACAACAGGCCTTGTGAATACAACAGTGAACAGCACAGTATACAGTGATGGTCAGCTTGCCGTGTATGAGATCCCCCAGATTCTCCTTTCACAAGGTATCCTCAGCCCTCAAGCACCAGCATCAGCTCCTCTACCTCCAAAGCCTAAGAAGGCTTCTCCTCTTAATTCACATGCTCCTTCAACCTCGACCACCGTCTCTGTTGACTCTTGTGAAGCGACAGGTCTGCCCCACTATGCACCAATTATGGTATCCATTGGAGTGGCTGTTGTTGCGGCATTATCCTTATGCATATGA 1377 0.4139 MRKEELGVLVQSLKQMAAAREVVNISKKVGELIEDMTHRMLFGRCKDYQRADLKALVQETLILVGAFNIADYVPFLGALDLQGLKRRMKAISGAVDHILEKVIDEHKQDASENQGNHKDFVDVMLSLMNEMKNFHQEPSYLIEQENIKGIVWDIIIGAIDTSATTIEWLLSELFRHPRVMRQLQEELENVIGMERMVEEVDLANLVYLDMVLKEGLRLHPAGPLLLPHESIEDITLNGYYIPKKSRIIINAWAIGRDPNIWSNNVEDFFPERFIGSNIDFQGKDFQFIPFGSGRRKCPGMQLGLINVRLVLAQLVHCFDWKLPNGMLPSELDMSEEFGLALPRATHLHALPTYRLLPKVNMTTGLVNTTVNSTVYSDGQLAVYEIPQILLSQGILSPQAPASAPLPPKPKKASPLNSHAPSTSTTVSVDSCEATGLPHYAPIMVSIGVAVVAALSLCI* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0367 458 PRINTS E-class P450 group I signature 146 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS E-class P450 group I signature 287 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS E-class P450 group I signature 297 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS E-class P450 group I signature 166 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 FunFam Uncharacterized protein 12 350 - -
Vvi17g0367 458 PRINTS P450 superfamily signature 157 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS P450 superfamily signature 288 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS P450 superfamily signature 210 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 Gene3D Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 PANTHER CYTOCHROME P450 93A3-LIKE 1 355 - -
Vvi17g0367 458 SUPERFAMILY Cytochrome P450 3 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0367 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 290 299 IPR017972 GO:0005506|GO:0016705
Vvi17g0367 458 MobiDBLite consensus disorder prediction 400 426 - -
Vvi17g0367 458 Pfam Cytochrome P450 3 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0367 Vvi-Chr17 3825222 3830936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0367 23 356 Monolignol Biosynthesis Gene Families AT4G36220 42.939 2.95e-99 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0367 - - vvi:100259359 720.309