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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vvi17g0353
ATGGATCAAGATATGATGAATAAGAAACCGAACACAAAGAAACCTAGCATGTTAGAGGTTTCACAGCCGATGAGGAGAGTTCGAGTCACTTACTGTGATCCCGATGCCACCGATTCTTCCAGTGAAGATGAAGAATACAATGGCAAGAAGAAGCAATTGCTGAGATCCAAACGCACTGTCAAGGAGTTGTTTGTTCATGGAATTCCATATGAATCATCAGCAGAGACTTCTCCCCATATCAGTAATAATGGGGGCAAACTCAGCACCAAGTTTGACAGCAAAATTCAGAAAACCCCAAGATCATCCTCTATTTATAAAGGAGTTAGGCGCAGGAAGTGGGGAAAATATGCAGCAGAGATCAGAGACCCAATTCGAGGGGTTCGAATGTGGCTTGGTACTTATAATACTGCAGAAGAAGCTGCCAAAGCTTATCAAACGAAGAAGCTCGAGTTTGATACCATTCTTGGATCGGAGAAGCTTAAGAATAAGCATTCATCACCTTCAAGTTCAGCTGTTACATGCTCTTCAAGGCAGAAGCCATCTTCCTCAGAAGAGACCAATGGCTTATTTTCTCATCCCTCTCCATCATCTGTCCTGGAGATCTCCCGATCGGCTTCAATTGGCTCTGGCAATTCAGTTAAAGAAGATGACAATGCAATGAGAAACGACAAAGAAGAGCAACCTATTTCGTCTTTGACTGGCCCTGCCAGTTCAATTACAGAAGATAATGCCATGGAAGAAGACAAGGTTCCTGCTGCATCCCTCTTGGAAGAGCCCTTGTTTTTCCCACCATTCAATCAAGAGCTTAACTTGGGTTTTGACGACAACTCTTTATTTGGGAACAACTTTGAAGAATTTTTCGATGATCTCGACATGGAGGGTCTTCCAATGTGCGGTTTTGAAGATGGTGCAACAAATGGCCTTCCCAACTTCGACTTTGAGCTGGACAAGGAATTCGCATGGGTTGATGAAACCTTAAATATAGCCTGCCTCTAA
996
0.4327
MDQDMMNKKPNTKKPSMLEVSQPMRRVRVTYCDPDATDSSSEDEEYNGKKKQLLRSKRTVKELFVHGIPYESSAETSPHISNNGGKLSTKFDSKIQKTPRSSSIYKGVRRRKWGKYAAEIRDPIRGVRMWLGTYNTAEEAAKAYQTKKLEFDTILGSEKLKNKHSSPSSSAVTCSSRQKPSSSEETNGLFSHPSPSSVLEISRSASIGSGNSVKEDDNAMRNDKEEQPISSLTGPASSITEDNAMEEDKVPAASLLEEPLFFPPFNQELNLGFDDNSLFGNNFEEFFDDLDMEGLPMCGFEDGATNGLPNFDFELDKEFAWVDETLNIACL*
332
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vvi17g0353
331
SUPERFAMILY
DNA-binding domain
103
151
IPR016177
GO:0003677
Vvi17g0353
331
ProSiteProfiles
AP2/ERF domain profile.
104
163
IPR001471
GO:0003700|GO:0006355
Vvi17g0353
331
CDD
AP2
103
144
IPR001471
GO:0003700|GO:0006355
Vvi17g0353
331
Gene3D
AP2/ERF domain
104
158
IPR036955
GO:0003700|GO:0006355
Vvi17g0353
331
MobiDBLite
consensus disorder prediction
1
52
-
-
Vvi17g0353
331
MobiDBLite
consensus disorder prediction
74
95
-
-
Vvi17g0353
331
PIRSF
PTI6
2
250
IPR017392
GO:0003700
Vvi17g0353
331
PIRSF
PTI6
271
318
IPR017392
GO:0003700
Vvi17g0353
331
MobiDBLite
consensus disorder prediction
160
215
-
-
Vvi17g0353
331
MobiDBLite
consensus disorder prediction
160
242
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vvi17g0353
Vvi-Chr17
3717278
3718273
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vvi17g0353
16
330
AP2-EREBP Transcription Factor Family
AT1G68550
34.139
8.30e-32
119
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Vvi17g0353
AP2
4.7e-10
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vvi17g0353
-
-
vvi:104882341
666.381
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