Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0312 ATGGCAGCTAAACGGTTTCACGAAGAATCGGGTTCTGACCCAGATCAACCTGACGAAAAGCGGATCAGGGGGAGGCCTTCTCTGATGTCAGTATTTGGAGAAGTTCTTACGGGGAATTTCGTGGAGAACTTCTGCACGACCTTGGAGCCAATGCTCAGAAAAGTGGTGGTTGAAGAGGTGGAGAAGGGAATTCGCAAGTGCCGCTTCACCAAGTCTCCTTCTTTTCGAATCCAAGCACCAGAACCATCAACCATGCGGCTGACTTTCACTAAGAACCTTTCACTTCCTATATTCACGGGGACCAAGATTGTGAATGATGAAAACAAACCTCTTCAACTCATTATTGAGGACACAAGTGGTGATAATCAAAATATTCTGAGAGCTTTATCTCATTCTTTCAAAGTAGAGATAATTGTTCTCGACGGTGACTTTCCTGGAGGAGACCGTGAGAACTGGTCCACCGAAGAATTCGATAACAGTATCGTGAAGGAGAGGGCCGGAAAGCGCCCGTTGCTGGCCGGAGATGTGCTTGTCACTATGAGGGGTGGGGCTGCGGTGATCGGAGACATTGAGTTTACTGATAATTCGAGCTGGATTCGTAGCAGAAACTTCAGGCTTGGTGCAAGAGTTGTTCCTGATAGCTGCAAGGAATTTAGGATTCGTGAAGCCATTACAGAAGCCTTTGTGGTCAAAGACCACCGTGGAGAGTTGTACAAGAAGCACTATCCACCAATGCTGGATGATGAAGTATGGCGTCTTGAGAAGATTGGAAAAGATGGGGCTTTTCACAAGAAGCTAGCCTCGATAAACGTCAACAGTGTGCAAGACTTCTTGAAGCTGTCAATCGTTGATCCAGCCAAACTAAAAAATATATTAGGTGTTGGGATGTCAGACAGAATGTGGGAATCAACCATAAAGCATGCAAGAACATGCATGATAGGAAACAAACTGTATATTTACCGTGGATCCCATTTCACCATGACCTTGAATCCTATATGTACGGTTGTTAAGGTTAAGATTAATGGGCAGACATATGCTACTCCTCAAGAACTATCCTCTATTAGGACCTATCTCGAGGAGTTGGTTCGACAAGCATACGCTAATTGGGATTCATTAGAAGTTGTTGACGAAGTCCTGAATGAGACTGCTCTCCTAACTCAAGGTGAGCAGATAGTGGAGCAATATCCCAATCATGAGGTGACCATGGCAATACCATTTCAGCAACTTGGGAACCCAGCTGATACAAGTATGGGGGTGGGGTACACAGATGTAGGATGTAGCCATTGGCAGATGAATCCTTTATACCATGGCATACCATTTGATCATAGCAGCGTCCACTGTTACATCACACGCTCATCATCAGAAGGGGATGGAACATCTTCTTCAGGGGCGCCTTTTCCAAATGGAAGTTGA 1413 0.4536 MAAKRFHEESGSDPDQPDEKRIRGRPSLMSVFGEVLTGNFVENFCTTLEPMLRKVVVEEVEKGIRKCRFTKSPSFRIQAPEPSTMRLTFTKNLSLPIFTGTKIVNDENKPLQLIIEDTSGDNQNILRALSHSFKVEIIVLDGDFPGGDRENWSTEEFDNSIVKERAGKRPLLAGDVLVTMRGGAAVIGDIEFTDNSSWIRSRNFRLGARVVPDSCKEFRIREAITEAFVVKDHRGELYKKHYPPMLDDEVWRLEKIGKDGAFHKKLASINVNSVQDFLKLSIVDPAKLKNILGVGMSDRMWESTIKHARTCMIGNKLYIYRGSHFTMTLNPICTVVKVKINGQTYATPQELSSIRTYLEELVRQAYANWDSLEVVDEVLNETALLTQGEQIVEQYPNHEVTMAIPFQQLGNPADTSMGVGYTDVGCSHWQMNPLYHGIPFDHSSVHCYITRSSSEGDGTSSSGAPFPNGS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0312 470 MobiDBLite consensus disorder prediction 1 23 - -
Vvi17g0312 470 Pfam Calmodulin binding protein-like N-terminal domain 85 233 IPR046831 -
Vvi17g0312 470 PANTHER OS02G0177800 PROTEIN 16 407 IPR012416 GO:0005516
Vvi17g0312 470 Pfam Calmodulin binding protein central domain 245 311 IPR046830 -
Vvi17g0312 470 Pfam Calmodulin binding protein C-terminal domain 316 374 IPR046829 -
Vvi17g0312 470 MobiDBLite consensus disorder prediction 451 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0312 Vvi-Chr17 3262036 3265505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0312 11 370 Calmodulin-binding Proteins AT5G57580 46.757 5.49e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0312 - - vvi:100242382 951.429