Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0266 ATGCTTCTCCAGTCTAACCCTGTTCACAAGAAGGTCCCGGTGCTTGTGCAAGATGGTAGACCAATTGCCGAGTCCCTTGTCATCCTTGAGTACATAGATGAGGCATGGAAAGGCTACCCTCTATTGCCCGAGGATCCTTCTGAAAGAGCCAAAACCCGATTCTGGGCAAGATTCACTGATGAGAAGTGTGTGCTCGGTGCCTGGGCTGCTTGCTGTGCCAAAGGACATGAACGAGAGAAAGCTATAGAGTCTGCACAAGAATCGCTGAGTTTTCTAGAAAAGCAGATTGAAGGGAAGAAATTTTTTGGGGGAGAGACGATGGGCTTGCTGGATCTGGTGGTGGGTTCACTGCCTAACTGGATCGAATTCTTGGAAGAACATGGAGGCATGAAGCTGCTGGATGAAGAGAAGTTTCCATCCCTTTATGAATGGGCTCAGAAATTTATCAACATTCCAATCATCAATTTTATCATGCAATTTCAAGTAAATTTCATTTTATCACCATCATTTCTTATCATCTCGTTCAAGCCTTAA 534 0.4476 MLLQSNPVHKKVPVLVQDGRPIAESLVILEYIDEAWKGYPLLPEDPSERAKTRFWARFTDEKCVLGAWAACCAKGHEREKAIESAQESLSFLEKQIEGKKFFGGETMGLLDLVVGSLPNWIEFLEEHGGMKLLDEEKFPSLYEWAQKFINIPIINFIMQFQVNFILSPSFLIISFKP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0266 177 SFLD Main.3: Omega- and Tau-like 1 158 IPR045073 -
Vvi17g0266 177 FunFam Tau class glutathione S-transferase 42 166 - -
Vvi17g0266 177 SFLD Main (cytGST) 1 158 - -
Vvi17g0266 177 SUPERFAMILY GST C-terminal domain-like 34 158 IPR036282 -
Vvi17g0266 177 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 148 IPR045073 -
Vvi17g0266 177 Pfam Glutathione S-transferase, C-terminal domain 77 152 IPR004046 -
Vvi17g0266 177 Gene3D - 42 165 - -
Vvi17g0266 177 Pfam Glutathione S-transferase, N-terminal domain 2 34 IPR004045 -
Vvi17g0266 177 CDD GST_C_Tau 46 146 IPR045074 GO:0004364|GO:0006749
Vvi17g0266 177 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 45 169 IPR010987 -
Vvi17g0266 177 SUPERFAMILY Thioredoxin-like 2 42 IPR036249 -
Vvi17g0266 177 Gene3D Glutaredoxin 1 41 - -
Vvi17g0266 177 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 40 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0266 Vvi-Chr17 2707209 2720467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0266 1 154 Glutathione S-transferase Gene Family AT2G29420 44.805 2.99e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0266 K00799 - vvi:100267881 320.087