Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0265 ATGGGAGAAGAAGTGAAGGTGATTGGATCTATCAAAAGCGGTTTCTGCGTCAGGGTTGAGTGGGCTCTTAAACTCAAGGGGGTGGAGTATGAGTACATAAAAGAAGATCTAAGGAACAAGAGCCCCATGCTTCTTAAGTATAATCCTGTCCACAAGAAGGTCCCAGTGCTTGTCCACGGTGATAAACCTATTCCTGAGTCACTTGTCATCCTTGAGTACATCGACGAGACATGGAAGGACAACCCTCTGCTGCCTGAAGATCCATATGAGAGAGCCATGGCTCGTTTCTGGGCCAAGTATGCTGATGAAAAGTGTATGTTTGGGGCATGGGAAGCTTTCAAGGCTGAAGGGGAAGAAAAGGAGAAGGCCATGGAGTCAGCACTAGAATCATTTGCATTTCTGGAGAAGGCGATAAAAGGGAAGAAGTTTTTTGGAGGAGAGAAGATGGGGTTCTTGGATCTGGTAGTGGGTTGGATACCTCACTGGCTCAGTGTTTTAGAAGAAGTTGGAGGCATGAAGATGCTTGATGCTGAGAAGTTCCCATCACTCCATGAATGGGCTGAGAACTTCATCCAAATTCCACTCATTAAAGAATGCATTCCACCTAGAGATGTCTTGGTCAACCACTTCCATGCTACCTTCAGCTCCTTGCGCTCCTTATCTGCCAATAAGCCATGA 678 0.4631 MGEEVKVIGSIKSGFCVRVEWALKLKGVEYEYIKEDLRNKSPMLLKYNPVHKKVPVLVHGDKPIPESLVILEYIDETWKDNPLLPEDPYERAMARFWAKYADEKCMFGAWEAFKAEGEEKEKAMESALESFAFLEKAIKGKKFFGGEKMGFLDLVVGWIPHWLSVLEEVGGMKMLDAEKFPSLHEWAENFIQIPLIKECIPPRDVLVNHFHATFSSLRSLSANKP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0265 225 CDD GST_C_Tau 88 210 IPR045074 GO:0004364|GO:0006749
Vvi17g0265 225 Gene3D - 84 219 - -
Vvi17g0265 225 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Vvi17g0265 225 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi17g0265 225 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Vvi17g0265 225 CDD GST_N_Tau 5 78 - -
Vvi17g0265 225 Pfam Glutathione S-transferase, C-terminal domain 114 194 IPR004046 -
Vvi17g0265 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi17g0265 225 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Vvi17g0265 225 Pfam Glutathione S-transferase, N-terminal domain 13 76 IPR004045 -
Vvi17g0265 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Vvi17g0265 225 FunFam Tau class glutathione S-transferase 84 220 - -
Vvi17g0265 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Vvi17g0265 225 Gene3D Glutaredoxin 1 83 - -
Vvi17g0265 225 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0265 Vvi-Chr17 2705780 2706529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0265 2 222 Glutathione S-transferase Gene Family AT2G29420 48.869 2.33e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0265 K00799 - vvi:100264717 429.483