Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0264 ATGGGAGAAGTGAAAGTGCTTGGAGCTTCTCTAAGCTTTTTCTGTTGCAGGGTAGAATGGGCACTGAAGCTCAAGGGTGTAGCATATGAGTACCTGGAAGAAGACTTGAGAAACAAGAGCCCCATGCTTCTCCAGTCTAACCCTGTTCACAAGAAGGTCCCGGTGCTTGTGCACGATGGTAGACCGATTGCCGAGTCCCTTGTCATCCTTGAGTACATAGATGAGGCATGGAAAGGCTACCCTCTATTGCCCGAGGATCCTTCTGAAAGAGCCAAAATCCGATTCTGGGCAAGATTCACTGATGAGAAGTGTGTGCTCGGTGCCTGGGCTGCTTGCTGTGCCAAAGGACATGAACGAGAGAAAGCTATAGAGTCTGCACAAGAATCGCTGAGTTTTCTAGAAAAGCAGATTGAAGGGAAGAAATTTTTTGGGGGAGAGACGATGGGCTTGCTGGATCTGGTGGTGGGTTCACTGCCTAACTGGATCGAATTCTTGGAAGAACATGGAGGCATGAAGCTGCTGGATGAAGAGAAGTTTCCATCCCTTTATGAATGGGCTCAGAAATTTATCAACATTCCAATCATCAGTGAAAGAATACCAACAAAGGAAGAGCTGATAAACTACTTTCAGGGAGGGCAAAACAGCAGACTTACTACTGGAAAATGA 666 0.467 MGEVKVLGASLSFFCCRVEWALKLKGVAYEYLEEDLRNKSPMLLQSNPVHKKVPVLVHDGRPIAESLVILEYIDEAWKGYPLLPEDPSERAKIRFWARFTDEKCVLGAWAACCAKGHEREKAIESAQESLSFLEKQIEGKKFFGGETMGLLDLVVGSLPNWIEFLEEHGGMKLLDEEKFPSLYEWAQKFINIPIISERIPTKEELINYFQGGQNSRLTTGK* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0264 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 202 IPR045073 -
Vvi17g0264 221 Gene3D - 83 219 - -
Vvi17g0264 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vvi17g0264 221 CDD GST_N_Tau 4 77 - -
Vvi17g0264 221 Pfam Glutathione S-transferase, C-terminal domain 118 193 IPR004046 -
Vvi17g0264 221 FunFam Tau class glutathione S-transferase 1 85 - -
Vvi17g0264 221 Gene3D Glutaredoxin 1 82 - -
Vvi17g0264 221 SFLD Main (cytGST) 1 216 - -
Vvi17g0264 221 SUPERFAMILY GST C-terminal domain-like 75 210 IPR036282 -
Vvi17g0264 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Vvi17g0264 221 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vvi17g0264 221 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Vvi17g0264 221 FunFam Tau class glutathione S-transferase 83 219 - -
Vvi17g0264 221 SFLD Main.3: Omega- and Tau-like 1 216 IPR045073 -
Vvi17g0264 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0264 Vvi-Chr17 2704206 2704955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0264 3 211 Glutathione S-transferase Gene Family AT2G29420 46.411 2.64e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0264 K00799 - vvi:100257608 455.292