Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g0184 | ATGGCTTTGCGTTTGATCCTCCTCCTGCAACTTGCAGTACTGGTATGGGAGTTAGAAGTTGCCGCTGAACTAGCTCTGCCGGGCTGTGCCAGCCACTGCGGCAATATCAGCATCCCATATCCATTTGGGACTACCCCAGAATGCTACCTAAACCAAGATTTCTTCATCAATTGCAACTCCACCCATCAAGCTTTTCTGACGGACAGTAACATAGATGTTCTATCGATTTCGGTTTCGGGTCAATTGCGAGTTCTTTCGTATGTGGCTCGAGACTGTTACAACAAATCCGGGCAAAGAGTCGCCAACAACGATCCATGGATGACACTGGCGAAGTTCCCCATCTCCCATACTCGGAACAAGTTCATGACAGTGGGCTGCGACACCTACGCTTTCATTAAAGGCTCAAGTGGGAAAAAATACAAGACTGGCTGCTTATCACTGTGTGAGAGCAAAGATAGTGTTATCAACGGGTCTTGCTCGGGGATCGGCTGTTGCCAGACCACAATCCCTGTAAATGTAACGAGCATTGATATCAGTGTGGACAGCTACGACAGCTACACAGGTGTGTGGGAATTTAATCCATGCGGCTTCGCTTTTGTGGCTGAAGATGGCTATTTCAACTTCTCTTCCGCAGACCTCCTTGATTTACAGAACAAAACCAAGGTTCCTACAGTGCTTGATTGGACAATAGGAGATGAGAAATGCGACCAAGCAAAGGAGAATGGAACAAGTTACGCCTGCAAGGACAATAGCTACTGTTATGATCCAGACAATGGTCCTGGGTATAGGTGCAATTGCTCAGAGGGATATGAAGGAAACCCCTATCTCTTAAATGGTTGCAAGGATATCGATGAGTGTGAGGTTGATAACCCCTGCAATGTAACACATACATGCCGGAATTTACCAGGGAGTTTTAGTTGTTTTTGCCCGGCTGGGTACGAAGGTGATGGATTTAAAATTGGCACAGGCTGCAGTCCCATGCCTAGCTCAGAGTCGAAGTTTCCTTTGGTTAATGTTGCCTTAGGTATCAGCATAAGTCTTTTAGTTTTACTTTTGGTGAGTTCTTGGTTGTATTGGGGATTTAGGAAACGAAAGCTTATCAAATTGAAAGAGAAATTCTTTGAGCAAAATGGTGGTATCATGCTGCAACAACTACTCTCTAAGCACGAAGGATTTGCTGAAGCAACTAAAATATTTACTACAGAAGACCTCAAGAAAGCAACAAACAACTATGATGAAAGAAGAGTTTTAGGTCGTGGAGGTCAAGGAACAGTTTATAAAGGAATATTGGCAGATAATAGAGTTGTTGCAGTTAAAAAGTCCAAAATAATGGACCAAAGCCAAGTTGAGCAGTTCATTAATGAAGTGATTATCCTCTCCCAAGTCAATCATAGAAATGTGGTAAAGCTATTAGGATGTTGTTTAGAGACGGAAGTTCCTTTATTAGTCTATGAATTTGTGATTAATGGAACCCTTTATGATCATCTACACAACCAAGATCAAACATACTCTATTTCATGGGAAACTCGCTTACGAATAGCAACTGAAACGGCTGGAGCCCTTTGGTATTTACACTCTGCTGCTTCAACTCCGATTATCCATAGAGATGTGAAGTCTACTAACATCCTTTTAGACAACAATTATACTGCCAAGGTATCCGATTTTGGAGCTTCAAGATTAATACCTCTAGATCAAGCTCAATTGACGACACTGGTACAAGGGACTCTTGGATACTTAGATCCTGAGTACTTTCACTCGAGTCAATTAACCGAAAAGAGTGATGTTTATAGTTTTGGGGTTGTTCTTGTGGAATTACTAACAGGTAAAAAGGCACTTTCCTTTGATAGACTTGAAGAAGAGAGAAATTTAGCAATGTTCTTTGTTTCTTCAATGAAAGACGATCGCTTGTTTGAAATTCTTGATGATAGAGTTTTGAATGAGGGAAACACTAAGCATTTGAAGGAAGTTGCTATCTTAGCAAAGAGGTGTTTGATGGTAAAAGGAGAGGAAAGGCCTACTATGAAGGAAGTTGCGATGGAACTAGAGGGATTAAGAATATTAGAAACACATCCTTGGGTGAACAATAATTCAAATCCAGAAGAAACTGAATACTTGATTGGTCAATCACAAGATGCTTATAAAGGTGATAACAGTAGCAACATAATAGGATATGATAGCATAAGAGATCAAGTCATGGTGGACTTTAATGGTGGGCGGTGA | 2220 | 0.4144 | MALRLILLLQLAVLVWELEVAAELALPGCASHCGNISIPYPFGTTPECYLNQDFFINCNSTHQAFLTDSNIDVLSISVSGQLRVLSYVARDCYNKSGQRVANNDPWMTLAKFPISHTRNKFMTVGCDTYAFIKGSSGKKYKTGCLSLCESKDSVINGSCSGIGCCQTTIPVNVTSIDISVDSYDSYTGVWEFNPCGFAFVAEDGYFNFSSADLLDLQNKTKVPTVLDWTIGDEKCDQAKENGTSYACKDNSYCYDPDNGPGYRCNCSEGYEGNPYLLNGCKDIDECEVDNPCNVTHTCRNLPGSFSCFCPAGYEGDGFKIGTGCSPMPSSESKFPLVNVALGISISLLVLLLVSSWLYWGFRKRKLIKLKEKFFEQNGGIMLQQLLSKHEGFAEATKIFTTEDLKKATNNYDERRVLGRGGQGTVYKGILADNRVVAVKKSKIMDQSQVEQFINEVIILSQVNHRNVVKLLGCCLETEVPLLVYEFVINGTLYDHLHNQDQTYSISWETRLRIATETAGALWYLHSAASTPIIHRDVKSTNILLDNNYTAKVSDFGASRLIPLDQAQLTTLVQGTLGYLDPEYFHSSQLTEKSDVYSFGVVLVELLTGKKALSFDRLEEERNLAMFFVSSMKDDRLFEILDDRVLNEGNTKHLKEVAILAKRCLMVKGEERPTMKEVAMELEGLRILETHPWVNNNSNPEETEYLIGQSQDAYKGDNSSNIIGYDSIRDQVMVDFNGGR* | 740 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g0184 | 739 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 298 | 309 | IPR000152 | - | |
Vvi17g0184 | 739 | FunFam | Wall-associated receptor kinase 2 | 381 | 486 | - | - | |
Vvi17g0184 | 739 | SMART | egf_5 | 285 | 325 | IPR000742 | - | |
Vvi17g0184 | 739 | SMART | egf_5 | 234 | 281 | IPR000742 | - | |
Vvi17g0184 | 739 | FunFam | Fibrillin 2 | 281 | 321 | - | - | |
Vvi17g0184 | 739 | Pfam | Wall-associated receptor kinase galacturonan-binding | 29 | 82 | IPR025287 | GO:0030247 | |
Vvi17g0184 | 739 | Pfam | Protein tyrosine and serine/threonine kinase | 415 | 681 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi17g0184 | 739 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 532 | 544 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi17g0184 | 739 | CDD | EGF_CA | 282 | 316 | - | - | |
Vvi17g0184 | 739 | SMART | serkin_6 | 411 | 693 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0184 | 739 | Pfam | Calcium-binding EGF domain | 282 | 314 | IPR001881 | GO:0005509 | |
Vvi17g0184 | 739 | ProSiteProfiles | EGF-like domain profile. | 282 | 319 | IPR000742 | - | |
Vvi17g0184 | 739 | FunFam | Wall-associated receptor kinase 2 | 487 | 704 | - | - | |
Vvi17g0184 | 739 | ProSiteProfiles | Protein kinase domain profile. | 411 | 693 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0184 | 739 | Gene3D | Phosphorylase Kinase; domain 1 | 377 | 486 | - | - | |
Vvi17g0184 | 739 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 702 | - | - | |
Vvi17g0184 | 739 | CDD | STKc_IRAK | 417 | 684 | - | - | |
Vvi17g0184 | 739 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 282 | 307 | IPR018097 | GO:0005509 | |
Vvi17g0184 | 739 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 21 | 694 | IPR045274 | GO:0007166 | |
Vvi17g0184 | 739 | SUPERFAMILY | EGF/Laminin | 282 | 319 | - | - | |
Vvi17g0184 | 739 | Pfam | Wall-associated kinase | 157 | 267 | IPR013695 | GO:0004674|GO:0016020 | |
Vvi17g0184 | 739 | FunFam | Wall-associated receptor kinase 2 | 233 | 280 | - | - | |
Vvi17g0184 | 739 | Gene3D | Laminin | 232 | 320 | - | - | |
Vvi17g0184 | 739 | SMART | egfca_6 | 282 | 325 | IPR001881 | GO:0005509 | |
Vvi17g0184 | 739 | SUPERFAMILY | Protein kinase-like (PK-like) | 395 | 682 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g0184 | Vvi-Chr17 | 1703011 | 1706116 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g0184 | 1 | 739 | Receptor kinase-like Gene Family | AT1G21230 | 49.067 | 0.0 | 686 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vvi17g0184 | PK_Tyr_Ser-Thr | 5.2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g0184 | - | - | vvi:100252663 | 1472.99 |