Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0172 ATGGGCAAAGAGGAAAGCCCACAAATTACCAGAAGAACAACCCGATCCTCCTCTTCCACCCCCATTCTAAAGAATGGCGAGGAAACAACAAAAACAAGTGAACCCCACCCTCTTACAATCAATGACCTTGTATTTGGAGGGGAACCCATAAAATTGGATGAACTACTATCTAGTTTCCCTGGCAGAAGGATTCAAATTCTTGAGCTCATGCGTCTGTTGGGTCCTTTGAACTCTCCTATGCTTCCTCTCTTTCTTTATGGAGGTACCTCTACAGGAAAAACGAGCATAATTCTTCAGATATTCAGACATCTCAACCGCCCATTTGTTTACTCAAGCTGTCTTACATGTTACAGTCCCCGGATATTGTTTGAATCCATCATGAACCAGCTGCTGCTTCATAGAAAGAATGCAGACAATGGTTATGCGAGCGCAAAGCGCTGTGAAAGGCCATCTGATTTTGTTGTTTCCCTTCGGGAAGCATTAACTAATGTTTTGAATACTCTCAAGGAGAACTCAGGGAAATCAAGCTCAAGGAAGCCGGCGGGACAGGCTAATGGAAGGATGATTTACTTGATATTTGACAATTTGGAGCTTGTTCGAGAATGGGATAAAAGTTCTAGTATATTGCCATTTCTCTTTGAGCTTTATGATATTCTAAATATGCCTGAGGTGGGTCTAATCTTTATCAGTAAGGTGTCACCTGATGCATATTACTCAGATAGAGGTTATGTTGAACCTATCCCGATTCTTTTTCCTGATTATACAGAGGATAGTCTTCGCCAAATCTTCATGAGGAACCAAGCAAACCCAAAGCTCTATTCCTCTTTTCTTGATGTTGTATTAAGGACTTTCTCTAGAATTACTAGACGGGTTGATGAGTTATCTACTGCCTTTTCACCATTATTTAAAAAATACTGTGAACCCTTGAGTGATCCTGGACTTGTTCCCAATGAAGACATGAAGAGAAAGCTGTTTAGCCACCTTCAACCACATCTTGCTCCTGCTCTGAATGAAATATTTAAAGTTCAATCTCAGCCTTCCCCTGAAGTTGAAGCCAAGCAGGAGAAAGTGAAGCGGAAAAGCAATGCAAACAAATTGGGAGGTCGTGAAGCTTTTGATGAGATCGATTTCCATATGTCTACTTCTGCAAAATATCTTATTATTTCGGCATTCCTTGCTTCAAGAAACCCAGCTACCCTTGATGCATCACTATTTGATTCCACTGGGGGTTCGGATAATCGGAAACGAAAGAGGAAGAGTTCTGAAAAATCAATGGAGCAGAAAGAAACAGCAGAGCAGGAATTGCTTATGAAGGGACCTGGAACTTTCCCATTGGAGAGATTATTGGCCATATTTCAGTGTCTCACATCTGTGGTAGAAAGTTCACTGGGTGAAGACCAACAAATAAATGAAGGCTTGGGAGCTGGTAATGGGGATAGTGGTCTAATGTCTGATGTTCTTTTGCAGCTATCCAGTCTCTGTAATGCTAATTTTATTAGCAAAGGAGGGAGTTGCCCATTAGAAGGCTCAACCCGATACCGAGCTACCATTTCTGAAGATCTGGCTCTGAAGGTAGCAAGGAGCCTAAAGTTCCCTCTCTCGAAGTACTTGTATAGAGGATAA 1623 0.4171 MGKEESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTINDLVFGGEPIKLDELLSSFPGRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSPRILFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREALTNVLNTLKENSGKSSSRKPAGQANGRMIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPIPILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCEPLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRKSNANKLGGREAFDEIDFHMSTSAKYLIISAFLASRNPATLDASLFDSTGGSDNRKRKRKSSEKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYRG* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0172 540 Pfam AAA ATPase domain 59 215 IPR041664 -
Vvi17g0172 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 306 IPR027417 -
Vvi17g0172 540 FunFam Origin of replication complex subunit 5 59 240 - -
Vvi17g0172 540 MobiDBLite consensus disorder prediction 1 38 - -
Vvi17g0172 540 MobiDBLite consensus disorder prediction 410 432 - -
Vvi17g0172 540 MobiDBLite consensus disorder prediction 11 37 - -
Vvi17g0172 540 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Vvi17g0172 540 Gene3D - 59 237 IPR027417 -
Vvi17g0172 540 MobiDBLite consensus disorder prediction 402 432 - -
Vvi17g0172 540 Coils Coil 414 434 - -
Vvi17g0172 540 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 249 537 IPR047088 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0172 3 539 Core DNA Replication Machinery Family AT4G29910 62.268 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0172 K02607 - vvi:100243867 1045.8