LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi17g0170	ATGTATAGTCAGTCAGAGCTAGACCACTTCATGGAAGCATATTGCACAACACTGACCAAACTGAAAGAAGCAATGGAAGAACCTCAACAAGAAACCTTGGCTTTCATTAATAGCATGCAATCACAACTTGAGGAACTCTCTGGGAGCCAACATGAACCACCTCAACCTCCCACCATTTCTTCTGGTAAGTTAAAACTTACACTTGTTTGA	210	0.4143	MYSQSELDHFMEAYCTTLTKLKEAMEEPQQETLAFINSMQSQLEELSGSQHEPPQPPTISSGKLKLTLV*	70

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi17g0170	69	PANTHER	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1	3	51	-	-
	Vvi17g0170	69	SMART	KNOX2_2	1	48	IPR005541	GO:0003677\|GO:0005634
	Vvi17g0170	69	MobiDBLite	consensus disorder prediction	39	69	-	-
	Vvi17g0170	69	Pfam	KNOX2 domain	4	46	IPR005541	GO:0003677\|GO:0005634

Showing 1 to 4 of 4 entries

Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi17g0170	6	46	Homeobox Transcription Factor Family	AT4G08150	51.220	4.20e-08	46.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi17g0170	-		-	vri:117904548	140.198

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