Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0170 ATGTATAGTCAGTCAGAGCTAGACCACTTCATGGAAGCATATTGCACAACACTGACCAAACTGAAAGAAGCAATGGAAGAACCTCAACAAGAAACCTTGGCTTTCATTAATAGCATGCAATCACAACTTGAGGAACTCTCTGGGAGCCAACATGAACCACCTCAACCTCCCACCATTTCTTCTGGTAAGTTAAAACTTACACTTGTTTGA 210 0.4143 MYSQSELDHFMEAYCTTLTKLKEAMEEPQQETLAFINSMQSQLEELSGSQHEPPQPPTISSGKLKLTLV* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0170 69 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 3 51 - -
Vvi17g0170 69 SMART KNOX2_2 1 48 IPR005541 GO:0003677|GO:0005634
Vvi17g0170 69 MobiDBLite consensus disorder prediction 39 69 - -
Vvi17g0170 69 Pfam KNOX2 domain 4 46 IPR005541 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0170 6 46 Homeobox Transcription Factor Family AT4G08150 51.220 4.20e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0170 - - vri:117904548 140.198