Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0169 ATGAATCCTCAACCGAGCTCTGGGTCCTCTCATGACTTCAAGAAAGAGACATGGAGGCATACATTCCTTTTGGCATTTCAAAGCCTCGGAATAGTTTATGGTCGCTTGAGTACTGCTCCACTATATGTATTTATGTCAATTCCAAGAGAGGATATAATATCAGAACAGAGGGTATATGAGCTCTTCTCCTTTGTGTTCTGGACTATGACCATCATTCCTCTACTGAAGTATGCCTTCATAGTATTGAGAGCTGATGACAATGGAGAGGGTGGTACTTTTGCTTTATACTCATTGCTTTGCCGGCATGCCAAAGTGGGTCTGCATCCAAATGATAGAAGTGCTAATGAAGTTATGAAAAGCATAAGTGCACCTGCTTCTAAGACCAAGGTGGAATCAAGAGCCAGAAGGGCCATTGAAAAACATAAAAGCAGTCACTATTTGATGTTGTTTTTGGCTCTGTTCGGGTCTTGCATGGTGATTGGCGATGGGGTACTGACCCCAGCTATTTCTGTTGCCTCCTCACAAAGAGTGGGGGACGACATAGAAAAAGCCTTCAAAAGATATGTTCCGGTCCCCTTTGCATGTGCTATATTGGTAGGCCTTTTCACACTGCAACACTATGGGACTCATAAAATTGGGTTTTTATTTGCACCGATCATTGTTATTTGGCTCTTCTTCATCAGCGGGGTGGGTTTATACAATATCTTTTATTCGGACCATCAAATCATCTATGCAGTCTCCCCAGTATACATGTACAGATTTATGAGGAACTTCGACCATCAAGGTTGGAGGTCATTAGGCAGCATCCTTCTATCTGTAGCAGGATCAGAGGCTATGTTTGCAGATCTTGGCCATTTCTCAAAGAAATCACTGAAGATTACTTTTGTCTGCTTGATTTATCCAGCCCTGATTTTATGTTATGCGGGTCAAGCTGCATTTATCTCCAAAAACTGGCGTGTGTTTGAAGATGTTACTTATCTTAGTGAATCAGTACCTGGAGCCTTTCTTCGCCATATTGTCGTATTGTTGTCTCTTCTTGCTTCTGCTGTTGGAAGCCAAGCAACCATTACTGCCAGTTTCTCTGTCATAAACCAGTGCCTGGCACTCGGTTGTTTTCCCAGAGTAAAAGTTATTCATACATCAGATACTATGAATGGGCGGGTTTATATTCCAGATGTCAACTGGTTATTGATGATTCTCAGCCTTGGCATTGTAATAGCTTTCCAAGACATTGCACGAATTGGAAATGCAACAGGTCTAGCTATAATTTCTGGAATGCTAGTAACCACTTGTCTGATGTCGCTTGTAATCACATTGTACTGGGAGAAGAGTCTGTTTGTCTCTGCATGCTTTTTATTATCTTTTGGCTTGGTTGAGATAATGTATCTGTCAGCATGTATGTCAAACTTTCACAAGGGAGCATGGTATCTAGTTGTTCTTTTCGTATTTTCCATGACAATCATGCTTTCATGGCACTATGGCACCATGAAGAAGTATGAGTTTGATTTACAGAATAAGGTGTCCATGGAATGGATTACAGTGATGAGCCCTGGTCTTGGGGTCTCCAGGGTCCCTGGAATTGGCTTCATCTACACTGATATTGTGTCAGGAATCCCAGCTTTTTTCTCCCACTTCATTACAAATCTTCCTGCATATCACCAAGTGCTGATCTTTGTGTCATTCAAGTCCTTACCAGTGCCTTGTGTCCCCCAAAAGCAGAGGTATCTCATAGGGAGGCTTGGCGCCAAGGACTATAAAGTTTACCGATGTATTGTAAGATATGGATACTGTGATAACATCAGGGACACAGATGATTTTGAGGATCAGATTATCCGTTGTATTGGAGAATTCATTGCTTTGGAAGAAAATGATTTGGAATCCTTGACCTCCCCAGAAGGAAGAATGATTGTTGTTGGAAACCCAATGCTGGATGGAAATGCCTTGGTTCCCATCCCTGAAATGAACTCAAATTTGGCCTCTCCAAGGTTGTCAAACAATGGAACTCAGAGAACCCTGTCTAGTGATTCAATTGAGAGTGCATCTGCTCTTGTCACAAGAAGAAAGGTCAGATTCATGTTGCCTCCAGAGAGCCCCAGAATGCAGGTTTCTGTCAGGGCAGAACTCCGAGAACTAGTTGATGCCAGGGAGAGCGGCACTGCATATTTCTTGGGCCAGTCACATCTGAAAGTGCGTGATGGCTCAAGCTTTCTGAAGAGATTCCTGATCATGACCTATGTTTTTCTTGATAAGAATTGCCGTGAGCCTCCGGTAGCACTCAACATTCCTCATGCTGCTCTTGTAGAGGTTGTTCTTTTGAACCCCAACTTCATTTTCTTTATATAA 2343 0.4251 MNPQPSSGSSHDFKKETWRHTFLLAFQSLGIVYGRLSTAPLYVFMSIPREDIISEQRVYELFSFVFWTMTIIPLLKYAFIVLRADDNGEGGTFALYSLLCRHAKVGLHPNDRSANEVMKSISAPASKTKVESRARRAIEKHKSSHYLMLFLALFGSCMVIGDGVLTPAISVASSQRVGDDIEKAFKRYVPVPFACAILVGLFTLQHYGTHKIGFLFAPIIVIWLFFISGVGLYNIFYSDHQIIYAVSPVYMYRFMRNFDHQGWRSLGSILLSVAGSEAMFADLGHFSKKSLKITFVCLIYPALILCYAGQAAFISKNWRVFEDVTYLSESVPGAFLRHIVVLLSLLASAVGSQATITASFSVINQCLALGCFPRVKVIHTSDTMNGRVYIPDVNWLLMILSLGIVIAFQDIARIGNATGLAIISGMLVTTCLMSLVITLYWEKSLFVSACFLLSFGLVEIMYLSACMSNFHKGAWYLVVLFVFSMTIMLSWHYGTMKKYEFDLQNKVSMEWITVMSPGLGVSRVPGIGFIYTDIVSGIPAFFSHFITNLPAYHQVLIFVSFKSLPVPCVPQKQRYLIGRLGAKDYKVYRCIVRYGYCDNIRDTDDFEDQIIRCIGEFIALEENDLESLTSPEGRMIVVGNPMLDGNALVPIPEMNSNLASPRLSNNGTQRTLSSDSIESASALVTRRKVRFMLPPESPRMQVSVRAELRELVDARESGTAYFLGQSHLKVRDGSSFLKRFLIMTYVFLDKNCREPPVALNIPHAALVEVVLLNPNFIFFI* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0169 780 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 769 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi17g0169 780 Pfam K+ potassium transporter 25 597 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi17g0169 780 NCBIfam potassium uptake protein 24 769 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0169 Vvi-Chr17 1503066 1509601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0169 10 769 Inorganic Solute Cotransporters AT2G40540 48.861 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0169 K03549 K12236 vvi:100268010 1515.36