Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0127 ATGGCCATGTGGGTTTTTGATGATCTTGTCGAAGGTCTCTTTCTAGTTCTTCTGTTTCTGTTTCTTACGATTACATTTTCTGTTGGGTTTGAGCATGCTTTCAAGAAAAAAGCATGCCGTTTTGGTCCTCCATCGTACCCGTTCATTGGATGTCTGGTTTCATTCTACCAGAACCGCCGCCGGCTGCTGGAGTGGTACACTGATCTTTTATCGGAGTCTCCGAGCCAGACCATCGTGGTGCACCGGCTGGGTGCGCGGCGGACGGTCGTGACGGCGAACGCTGCCAATGTGGAGTACGTGCTGAAGACGAACTTCAGCAACTTCCCCAAGGGGAAGCCCTTCACTGAGATTCTTGGAGACCTTCTTGGCTTCGGGATATTCAACGTTGACGGCGACCTGTGGAGCTCGCAGAGGAAGCTCGCCAGCCATGAGTTCAGCACCAAGTCTCTGCGAGAGTTCGTGATGAGAATCCTTGAAGAAGAAGTGGAGGGGAGGCTACTTCCGTTGTTAGAATCCGCAATGGAGAAAAATGAAGTTTTGGATTTGCAGGACGTGTTGAGGAGATTCGCTTTCGAAACTGTTTGCAAAGTCTCTCTCGGCGTCGACCCCTGTTGCCTGGACCTTTCCCGTCCGGTGCCGCCCCTGGTTCGGGCCTTCGACCGTGCGTCGGAGATTTGCGCCATGAGAGGGATGGCGCCCGTGTACGCCGTGTGGAAGATGAAGCGAGCGTTTAATGTCGGCTCCGAGAGGAAGCTCAAGGAATCCGTACAACTGGTTCATTCTTCGGTGAGAGAAATTATTCAGAACAAGAAGAGGAAGCTGGAAGAGGACCGCGCCGAAGGAGACGGCGGCGACCTTCTGACGAGTCTGCTGTCGGCGGGTCACGGCGAGGAGGTGGTGAGGGATATGGTGATAAGCTTCATAATGGCCGGAAGGGACACAACGTCGGCAGCGATGACGTGGCTCTTCTGGTTACTCTCCCAGCATCCACCCATCGAATCCGCCATTGTCGCACATGTAGACTCACTCTACAGAAACCCACTCGATTTCGAAACTCTGAAAGAGATGAATTTCGTGAAAGCGTGCTTGTGCGAGTCCATGAGGCTGTACCCGCCGGTAGTATGGGACTCCAAGCACGCCGCTGCCGACGATACCCTGCCGGACGGCACCGCTCTCCGGGAGGGCGACAGGGTGACTTACTTCCCATATGGAATGGGGAGAATGGAGCATCTGTGGGGAAAAGACCGGTTCGAGTTCAGACCGGACCGGTGGTTAGAAGAACCGGAGGCGGACGGCGGCGGGCCTCTGAAGGCGGTGAGTCCCTACAAGTTCCCTGTTTTTCAGGCTGGTCCGAGGGTGTGCTTGGGGAAAGAGATGGCGTTCATTCAGATGAAGTACGTGGTGGCTTCCATTTTGAGAAGGTTCGAGATCAGGCCGGCCGGGTCGAACCGGCCGGTTTTCGTTCCCCTCCTGACGGCTCACATGGCCGGCGGTTTCAAAGTGGTGGTCCGGAAAAGAAGTGGCGGAAATGAGCCGTAA 1539 0.5517 MAMWVFDDLVEGLFLVLLFLFLTITFSVGFEHAFKKKACRFGPPSYPFIGCLVSFYQNRRRLLEWYTDLLSESPSQTIVVHRLGARRTVVTANAANVEYVLKTNFSNFPKGKPFTEILGDLLGFGIFNVDGDLWSSQRKLASHEFSTKSLREFVMRILEEEVEGRLLPLLESAMEKNEVLDLQDVLRRFAFETVCKVSLGVDPCCLDLSRPVPPLVRAFDRASEICAMRGMAPVYAVWKMKRAFNVGSERKLKESVQLVHSSVREIIQNKKRKLEEDRAEGDGGDLLTSLLSAGHGEEVVRDMVISFIMAGRDTTSAAMTWLFWLLSQHPPIESAIVAHVDSLYRNPLDFETLKEMNFVKACLCESMRLYPPVVWDSKHAAADDTLPDGTALREGDRVTYFPYGMGRMEHLWGKDRFEFRPDRWLEEPEADGGGPLKAVSPYKFPVFQAGPRVCLGKEMAFIQMKYVVASILRRFEIRPAGSNRPVFVPLLTAHMAGGFKVVVRKRSGGNEP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0127 512 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PANTHER CYTOCHROME P450 28 501 - -
Vvi17g0127 512 FunFam Cytochrome P450 33 508 - -
Vvi17g0127 512 Pfam Cytochrome P450 42 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 SUPERFAMILY Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 CDD CYP86A 76 499 - -
Vvi17g0127 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0127 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0127 Vvi-Chr17 1060849 1062387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0127 14 507 Cytochrome P450 AT3G48520 63.563 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0127 K20665 - vvi:100245827 999.964