Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0124 ATGGCGACAACAACCACAATCAGTGGTGGAGGCGGTGCCGGTGGTGCCGGTGGGGAGGACCGGGTCATGGCGACGGCGCAGCAAATCGTGAAGAGTTTGAACACCACCAAGGAAGTGACGGAGGATATGCTGTTGATCTTCTCCAGCTTTGACAACCGGCTCTCGAACATTTCGAATTTGATCGAAACGAAGACGGAGGTGGACCAGTTCGAGGCGGCGGAGAAGGTGATTATGAGGTGGGACTCGAACTCGGAGGCGTCGAGGCACACGCTACCGTGGGACGAGGCGCCGGAGGAGGCCGCCGAGTATTTGGCGGCGGTGGACGAGATCTTGCAGATGACGGAGGATTTGGCGATTCGATCGGACGGCGAGATGATGGATCGCGCCGAGAGTGCACTCCAGGTGGCGATGACGAGGCTGGAGGACGAGTTCCGCCACATACTGATTCGGAACACGGTGCCGCTCGACGCCGACAGGCTGTACGGGTCGATTCGGCGGGTTTCACTCTCGTTTCCGACCAACGAGGGGGAGATTATGGGGGATTTCGACGGCTTCGTTGATGATGATCAGGAAAATAGCTGTTATCACGAGAGAGGAGGGAGTTTGGGGGACGATGTGTGTGTGGATTTGATTCAGCCGGATGCGGTGGCGGAATTGAAGGAGATTGCCGATCGGATGATTAGGTCTGGGTACGAGAAGGAGTGTTGTCAGGTTTATAGCAGTGTTCGGCGCGATGTTTTGGACGAGTGTTTGTCGATTCTCGGTGTTGAGAAATTGAGTATTGAGGAAGTTCAGAAGATTGAGTGGAGGTCATTGGATGAGAAGATGAAGAAATGGATGCAAGCTGTGAAGATTGTTGTTAGGGTTCTTCTGTGGGGTGAGAAGAGGCTCTGTGACCAAGCTTTTAGTGGCTCCGATTTGATTAAGGAGGTTTGCTTCACTGAGACTGCCAAGAGTTGTGTGATGCAGTTGTTGAATTTCGGTGAGGCTGTTGCCATTGGGAGGAGATCCTCTGAGAAGCTTTTCCGCATACTCGATATGTATGATGCCTTGGCAGATGTGTTGCCAGACTTGGAAGCCTTGTTTTCAGATGAGTCGGGGCAGTTTGTCTGGAGTGAGGCCCGAGGAGTGCTGGCAGGCCTGGGGGAAGCGGCAAAGGGAACGTTTGCAGAGTTTGAGAATGCAGTTCGCTCTGAGACATCCAGGAGACCCATTCAAGGTGGTGAAATTCACCCCTTAACACGCTATGTGATGAATTATGTGAAGTTGGTTGTGGATTATAGTGAGACCCTCAACACTCTTTTAGAAAGTGAAGATGATGATGAATCAGCTCATTTGCAAAACCGTGATGGGGATAATTTGCAGTTAGGAAATACACCCCCAATTGGGCGTAGGTTGTTGTTGTTGATGTCATGCCTGGAATCCAACCTCACAGAGAAATCGAAGCTTTACGAGGATAATGCAATGCAATATATTTTCTTGATGAACAACATTCTTTACATAGTTCAGAAAGTGAAAGACTCTGAGCTTGGCAAGATTTTGGGAGATCACTGGGTCCGGAAGCGTCGTGGACAGATTCGCCAATATGCCACTAGTTATCTCAGAGCTTCATGGAGCAAGGTCCTGGCTTGTCTCAAGGATGAAGGCATTGGTGGGAGCTCAAGCAATGCCTCCAAGATGGCCCTTAAAGAAAGATTTAAAAATTTCAATGCATGCTTCGAAGATATTTATAGGATCCAGACAGCTTGGAAGGTCCATGATGCCCAACTCAGGGAAGAGCTTCGAATTTCTATATCAGAAAAGGTAATTCCCGCCTACCGTTCATTTATGGGTAGGTTTGGGAATAATCTAGAGAGTGGAAGAAATGCTGGAAAGTACATCAAATACACACCTGAGGATCTAGAGAACTACTTGTTGGATTTATTCGAAGGATCATCCCTTGTTCTGCACCATATGAGAAGAAAAACTGCATAG 1974 0.4924 MATTTTISGGGGAGGAGGEDRVMATAQQIVKSLNTTKEVTEDMLLIFSSFDNRLSNISNLIETKTEVDQFEAAEKVIMRWDSNSEASRHTLPWDEAPEEAAEYLAAVDEILQMTEDLAIRSDGEMMDRAESALQVAMTRLEDEFRHILIRNTVPLDADRLYGSIRRVSLSFPTNEGEIMGDFDGFVDDDQENSCYHERGGSLGDDVCVDLIQPDAVAELKEIADRMIRSGYEKECCQVYSSVRRDVLDECLSILGVEKLSIEEVQKIEWRSLDEKMKKWMQAVKIVVRVLLWGEKRLCDQAFSGSDLIKEVCFTETAKSCVMQLLNFGEAVAIGRRSSEKLFRILDMYDALADVLPDLEALFSDESGQFVWSEARGVLAGLGEAAKGTFAEFENAVRSETSRRPIQGGEIHPLTRYVMNYVKLVVDYSETLNTLLESEDDDESAHLQNRDGDNLQLGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKILGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGSSSNASKMALKERFKNFNACFEDIYRIQTAWKVHDAQLREELRISISEKVIPAYRSFMGRFGNNLESGRNAGKYIKYTPEDLENYLLDLFEGSSLVLHHMRRKTA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0124 657 Gene3D Exocyst complex component Exo70 75 648 - -
Vvi17g0124 657 Pfam Exo70 exocyst complex subunit 277 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi17g0124 657 SUPERFAMILY Cullin repeat-like 68 643 IPR016159 -
Vvi17g0124 657 MobiDBLite consensus disorder prediction 438 457 - -
Vvi17g0124 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 644 IPR004140 GO:0000145|GO:0006887
Vvi17g0124 657 FunFam Exocyst subunit Exo70 family protein 86 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0124 Vvi-Chr17 1030060 1032033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0124 20 656 EXO70 exocyst subunit family AT5G50380 64.732 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0124 K07195 - vvi:100268151 1263.44