Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0094 ATGATCAATGCCCCTAATGCAGCCGCACTTATTTTCATGGTTGCAATCGGGCCATCTATGGTAGTCATTGCTCTGATGTTTATAGTTAGACCTGTGGGAGGTCACAAACAACTTAGGCCCTCTGATAGTTCAAGCTTCTTATTTACCTTCAGTCTTTGCCTCATCCTGGCTGCTTATCTGCTGGGGGTCTTGCTGCTTGAGGATCTAGTTGGTTTGAGCCAAGCTCTAGTCACATTGCTCACTGTTCTTCTGATCGTTATAATATTGCTTCCAGTTGCAATTCCCATCATATTAGTCTTTTTCTCTGGACCAATAGCTCCATCAGAGGAGGCCTTTCTACCTGAGCCTCAGAAACAAGAGTCCGGCAAGTCTGAGCAGGATGGGGAAGAGGTCATTCTCAGTGAGGTCGAAGACGAGAAGCCGGTGGAAGTTGATTCACTTCCAGCATCCGAAAGGCATAAGCGAATAGCCCATTTGCAAGCCAAGCTCTTCCAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAGAGGAAACGAGGACCGCGCAGAGGAGAGGATTTTACCTTAATGCAGGCACTAATAAAGGCTGATTTTTGGCTCATCTTCGTATCCCTTCTACTAGCTGCTGGATCCGGCTTGACGATTATTGACAACATGGGCCAGATGTGTGAGTCTCTGGGGTACAGCGATACGAGCGTATTTGTCTCCATGATCAGCATTTGGAACTTCCTGGGACGGGTTGGGGGCGGCTACTTCTCTGAAAGTATTGTAAGAAACTTCGCCTTCCCAAGACCAGTGTCAATGGCAATGTTTCAAGTCCTCATGTCAGTTGGGCTGCTCTACTACGCCTTAGCCTGGCCTGGGGCGATATACGTCGTGAGCGTCCTAATAGGACTAGGCTACGGTGCCCACTGGGCAATTGTCCCTGCAGCAGCCTCAGAGCTCTTTGGTTTGAAAAGCTTCGGGGCATTATACAACTTCCTCACACTGTCAAGTTCTATTGGTACTCTCATATTCTCTGAGGTCATTGCCAGTGGCATATACGACCACTACGCAGAGAAACAAGCTGCCCTCAAGCAGCATAGCTTGGGAGCCATGGCTGGTCTGCCTCTTGGAAAAGATGAATCATTGAGTTGTGAAGGGTACATATGCTATTCCATCACTTGTGGCGTCATGTCAGGACTCTGCCTTGTTGCAGTTGTGCTGAGCTTGATTGTCGTTCATAGGACCAAAAGTGTTTATGCCAATCTCTATGGAAGATCTCAGGCATGA 1269 0.4831 MINAPNAAALIFMVAIGPSMVVIALMFIVRPVGGHKQLRPSDSSSFLFTFSLCLILAAYLLGVLLLEDLVGLSQALVTLLTVLLIVIILLPVAIPIILVFFSGPIAPSEEAFLPEPQKQESGKSEQDGEEVILSEVEDEKPVEVDSLPASERHKRIAHLQAKLFQAAAEGAVRVKRKRGPRRGEDFTLMQALIKADFWLIFVSLLLAAGSGLTIIDNMGQMCESLGYSDTSVFVSMISIWNFLGRVGGGYFSESIVRNFAFPRPVSMAMFQVLMSVGLLYYALAWPGAIYVVSVLIGLGYGAHWAIVPAAASELFGLKSFGALYNFLTLSSSIGTLIFSEVIASGIYDHYAEKQAALKQHSLGAMAGLPLGKDESLSCEGYICYSITCGVMSGLCLVAVVLSLIVVHRTKSVYANLYGRSQA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0094 422 Gene3D MFS general substrate transporter like domains 111 357 IPR036259 -
Vvi17g0094 422 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 414 - -
Vvi17g0094 422 SUPERFAMILY MFS general substrate transporter 10 412 IPR036259 -
Vvi17g0094 422 Pfam Nodulin-like 1 96 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0094 Vvi-Chr17 823973 825326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0094 1 422 Nodulin-like Gene Family AT5G14120 59.529 1.35e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0094 - - vvi:100247479 749.584