Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0075 ATGCTCAAGGCATGGGAGAGATGGCAATCCATATGTCCCAGAGCCAAGAAATCAATATTACTGATCATCCCATTTAGCCCTTCAAAAACATCAGAAGTTGGTAAGCCTAAAAAAAAGTCCCCAATGCCTCCCAAAGGCTACTTCCCAGTCTATGTCGGAGCCCAGAAACAACGGTTCGTGATCAAGACCCAGCTCGCCAAGCACCCACTATTCAAGACGCTGCTAGAGGAAGCTGAATTGGAATATGGGTACAGTAATGGAGGCCCTGTGTTGCTTCCATGCGATGTTGATACCTTCTACGAAGTGTTGGTACAAATGGAGAGTGGTGGGGCTCAAGAGAGTAGTTCCCGTGGCGGCACGTTTAGCTTCCTGAGCCCATCTCCTCGTCCGGGCTGCGGCGAAATGGCCGAGGGTTATGGCCACTACAGCCTGCTCAGTCCATCTCGGATGGTTAGGTGA 459 0.5076 MLKAWERWQSICPRAKKSILLIIPFSPSKTSEVGKPKKKSPMPPKGYFPVYVGAQKQRFVIKTQLAKHPLFKTLLEEAELEYGYSNGGPVLLPCDVDTFYEVLVQMESGGAQESSSRGGTFSFLSPSPRPGCGEMAEGYGHYSLLSPSRMVR* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0075 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 103 IPR003676 GO:0009733
Vvi17g0075 152 Pfam Auxin responsive protein 36 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0075 Vvi-Chr17 691438 691896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0075 41 118 Calmodulin-binding Proteins AT3G43120 43.590 8.60e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0075 K14488 - vvi:100268140 304.679