Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0037 ATGGCCTTCATCGAAAACTCTCGCCAGTCACTCGTTCCGAGCTTCCTCTACACAACGCCGGTTTCGAAGAAGCTCTTTGATGTGGACACTTTGGTGCGCGGGAACCCTACCTTGCGTACGGCGTCGTCGAATGGAGGAGCGTCCAAGAGTTTCATGATTCCGGCTCCGAGCGAGCCGGGGAAGATCGCGATGTTCTCACCGGCTTATTACGCCGCGTGTACCGTCGGAGGGACCCTTTGCTGTGGTCTCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTCAAGGAGCAGGGAGTTAAAGGCTTCTTCAGGGGTTGGGTACCAACCCTGCTTGGTTACAGTGCTCAGGGAGCCTGCAAGTATGGGTTCTACGAGTTCTTTAAGAAATACTACTCAGATATTGCTGGTCCTGAGTATGCAACCAAGTACAAGATATTGATTTATCTTGCTGGGTCTGCATCTGCTGAAATTATTGCTGATGTTGCCCTATGTCCCATGGAGGCTGTGAAGGTTCGTGTCCAAACTCAGCCTGGTTTTGCCAGAGGATTGTCGGATGGTCTTCCTAAGTTTGTCAAGTCTGAAGGTGCTCTTGGGTTGTACAAGGGTCTTGTTCCTCTATGGGGACGACAGATTCCATATACAATGATGAAGTTTGCATCCTTTGAGACTATTGTGGAGATGTTATATAAGTATGCCATTCCAACCCCCAAGGAACAGTGCAGCAAATCTTTGCAACTTGGGGTGAGCTTTGCTGGTGGATATGTGGCTGGTATATTATGTGCTATCGTGTCACACCCTGCTGACAACCTGGTCTCTTTTCTGAACAATGCCAAGGGGGCGACTGTGGGTGATGCTGTGAAGAATCTAGGACTGTGGGGTCTCTTCACCCGTGGTCTTCCTCTTCGTATAGTCATGATTGGAACCCTTACAGGAGCCCAATGGGGTATCTACGATACTTTCAAAGTTTTTGTTGGGCTGCCAACAACTGGAGGTGTTACTCCTGCTCCTGCTGCCACTGTTCCTGCAAAGGTGTGA 1101 0.4923 MAFIENSRQSLVPSFLYTTPVSKKLFDVDTLVRGNPTLRTASSNGGASKSFMIPAPSEPGKIAMFSPAYYAACTVGGTLCCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKYGFYEFFKKYYSDIAGPEYATKYKILIYLAGSASAEIIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKEQCSKSLQLGVSFAGGYVAGILCAIVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDTFKVFVGLPTTGGVTPAPAATVPAKV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0037 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 152 IPR018108 -
Vvi17g0037 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 345 IPR018108 -
Vvi17g0037 366 Gene3D Mitochondrial carrier domain 70 346 IPR023395 -
Vvi17g0037 366 SUPERFAMILY Mitochondrial carrier 69 341 IPR023395 -
Vvi17g0037 366 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 356 IPR044677 GO:0005315|GO:1990547
Vvi17g0037 366 Pfam Mitochondrial carrier protein 167 253 IPR018108 -
Vvi17g0037 366 Pfam Mitochondrial carrier protein 70 154 IPR018108 -
Vvi17g0037 366 FunFam Phosphate carrier protein, mitochondrial 68 346 - -
Vvi17g0037 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0037 Vvi-Chr17 286974 292106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0037 4 359 Chloroplast and Mitochondria Gene Families AT5G14040 76.567 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0037 K15102 - vvi:100261124 695.271