Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1353 ATGCAATCAGTAGAAAACGAGAAAAAAAAGAATCTGAAACGATCAAGATCATTCCCTTACGAAATGCCAGTAACTGACACCTGTGTTGCACAGTCTCTCGAGGATTGCATCCTTTTCCCGGTTGAAGAGATAGTTCAATACCCATTGCCTGGATATGTTGCTCCTACTTCCATTGGTTTTAGTCCCGATGACAGTTTGATAACTTATCTATTCAGTCCTGATCACACTTTGAATAGGAAAGTTTTTGCTTTTGATCTTGAAACATGTAAGCAAGAATTGTTTTTTAGTCCTCCAGATGGTGGGCTCGATGAGAGTAATGTATCACCAGAAGAGAAGTTGAGGAGGGAGAGATCGAGGGAGCGTGGGTTGGGAGTGACAAGATACGAATGGGTGAAGACGAGCTTGAAGAAGAGAATGATCATGGTGCCTTTGCCTGTCGGGATCTATTTCCAGGAATTCTCTTGTTCAAAACCAGAGCTTAAGCTTGCAAGTACATCATTATCACCAATTATAGATCCACATCTCTCTCCAGATGGCACCATGCTTGCTTATGTAAGAGATCATGAGTTGCATGTTATAAATCTCTTGGATGATGAACCGAGACAATTAACATTTGGTGCCAATGGCAATACTTTGACACATGGGCTTGCTGAATATATAGCCCAGGAGGAGATGGATAGGAAGAATGGGTACTGGTGGTCACTGGACAGTAGATTCATCGCATTCACACAAGTTGATTCATCTGAGATACCGCTTTTCAGAATCATGCACCAGGGTAAAAGCTCAGTTGGTGCTGATGCTCAGGAAGACCATGCATATCCCTTTGCAGGGGCTTCAAATGTCAAAGTCCGCCTTGGGGTAGTATCTGCTGCAGGAGGCCCTGCTACTTGGATGGATCTTCTCTGTGGAGAAATGCATGATGGAAACAATGAGGAGGAGTATTTGGCCAGAGTAAATTGGATGCATGGAAACATACTCACTGCACAGGTTTTGAACAGGTCTCATTCCAAACTAAAGATCCTCAAGTTCGATATCAATACAGGTCAAAGGAAAGTTATATTGGTAGAAGAACAAGATACATGGGTCACTTTGCACGATTGTTTTACCCCTCTTGACGTAGGAGTCAACAGATTTTCTGGGGGATTTATCTGGGCCAGTGAAAAGACAGGATTTAGGCATCTATATCTGCATGATGCAAATGGGACTTGTCTAGGACCCATAACCGAAGGTGATTGGATGGTTGAGCAAATTGCCGGTGTAAATGAGGCTGCAGGACTAGTATATTTTACCGGAACCCTAGATGGGCCTTTGGAATCCAACCTTTACAGTGCTAAACTATTCCTGGATGGCAATGAACCCTTGCAGGCCCCTCTGAGGTTGACTCACGGCAAGGGGAAACACATGGTTGTGCTTGATCACCAGATGCAGAGCTTTGTCGACATTCATGACTCCCTGGATTTTCCCCCTAGGGTTTTACTTTGCTCCTTGAGTGATGGAAGCTTGGTTATGCCCCTGTACGAGCAACCATTCACCGTTCCCAGATTCAAACGGCTTCAACTTGAGCCTCCAGAGATAGTCCAAATTCAGGCAAATGATGGAACTACACTGTTTGGAGCTCTGTATAAACCTGATGAAACAAGATTTGGACCTCCACCATACAAAACCTTGATCAGTGTCTATGGCGGCCCAAGCGTGCAGCTTGTTTGTGATTCTTGGATGAATACAGTTGACATGAGAGCCCAGTATTTACGTAGCAGAGGCATCCTAGTGTGGAAGTTAGATAACAGAGGAACCGCCCGCCGTGGACTAAAGTTCGAAAGTTGCCTGAAATACAATGCTGGCCGGATTGATGCTGAGGACCAGCTCACTGGAGCTGAATGGCTTATCAAAAAAGGCCTGGCAAAAGTTGGTCATATCGGGCTGTACGGATGGAGCTATGGTGGGTATCTCTCAGCCATGACTTTGGCCAGGTTCCCTGACATCTTCCGCTGTGCTGTTTCTGGTGCCCCCGTCACATCGTGGGATGGCTACGACACATTCTACACCGAGAAGTACATGGGCTTGCCTTCAGAGAACCCTGCAGGCTACGAGTACAGCTCAGTTATGCATCATGTACACAAGATCAAAGGTAGCTTGTTGATTGTACATGGCATGATAGACGAGAATGTGCATTTCAGGCACACTGCAAGGTTGGTGAATGCCCTTGTCTCGGCCGGAAAGCCCTACGAACTCTTGATTTTCCCGGATGAACGCCACATGCCTCGCAGGTTTCGGGACCGCATCTACATGGAAGAGAGGATCTGGGACTTCATTGAGAGGAATTTGTAG 2328 0.4583 MQSVENEKKKNLKRSRSFPYEMPVTDTCVAQSLEDCILFPVEEIVQYPLPGYVAPTSIGFSPDDSLITYLFSPDHTLNRKVFAFDLETCKQELFFSPPDGGLDESNVSPEEKLRRERSRERGLGVTRYEWVKTSLKKRMIMVPLPVGIYFQEFSCSKPELKLASTSLSPIIDPHLSPDGTMLAYVRDHELHVINLLDDEPRQLTFGANGNTLTHGLAEYIAQEEMDRKNGYWWSLDSRFIAFTQVDSSEIPLFRIMHQGKSSVGADAQEDHAYPFAGASNVKVRLGVVSAAGGPATWMDLLCGEMHDGNNEEEYLARVNWMHGNILTAQVLNRSHSKLKILKFDINTGQRKVILVEEQDTWVTLHDCFTPLDVGVNRFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGDWMVEQIAGVNEAAGLVYFTGTLDGPLESNLYSAKLFLDGNEPLQAPLRLTHGKGKHMVVLDHQMQSFVDIHDSLDFPPRVLLCSLSDGSLVMPLYEQPFTVPRFKRLQLEPPEIVQIQANDGTTLFGALYKPDETRFGPPPYKTLISVYGGPSVQLVCDSWMNTVDMRAQYLRSRGILVWKLDNRGTARRGLKFESCLKYNAGRIDAEDQLTGAEWLIKKGLAKVGHIGLYGWSYGGYLSAMTLARFPDIFRCAVSGAPVTSWDGYDTFYTEKYMGLPSENPAGYEYSSVMHHVHKIKGSLLIVHGMIDENVHFRHTARLVNALVSAGKPYELLIFPDERHMPRRFRDRIYMEERIWDFIERNL* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1353 775 SUPERFAMILY DPP6 N-terminal domain-like 51 513 - -
Vvi16g1353 775 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 167 489 IPR002469 GO:0006508
Vvi16g1353 775 Gene3D alpha/beta hydrolase 517 774 IPR029058 -
Vvi16g1353 775 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 54 772 - -
Vvi16g1353 775 Pfam Prolyl oligopeptidase family 576 775 IPR001375 GO:0006508|GO:0008236
Vvi16g1353 775 Gene3D - 41 515 - -
Vvi16g1353 775 SUPERFAMILY alpha/beta-Hydrolases 522 775 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1353 506 773 Carbohydrate Esterase AT5G36210 23.214 4.99e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1353 K01278 - vvi:100241749 1580.07