Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1298 ATGGCAGCTCTTGCTTCGATCACTCCACACTCTTCTTCTTCTTTACATCCCAAGTCCCACCTCTCTTCAAACACTAGTCACCACTCCATTTCTTCGTACTGCGTGACCAGATCAGTTAGGACTAATAGGCAGAGACTATATTCAGAGTCTGGCTCTAGGGGCCTAAAGATCCAAAGTGCAGCAACAAAACCCGCAAAATCGCCAGCTGAGGAAGACTGGAAGATTAAGAGGGAGGTTCTGCTAGAGAAAAAGGTAAGGAGTGTGGATGCCAAGGAAGCTCTACGCCTTCAGCAAGAGAATAACTTTGTGATTCTTGACGTCAGGCCTGAAGCAGAATTCAAAGAGGCTCATCCTCCAGGCGCTATTAATGTGCAAATATATAGGCTTATAAAGGAATGGACAGCGTGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGCATATTTGCAGGCACAGAAGAGAACCCAGAGTTCATGCAAAGTGTGGAATCGAAAATAGATAAGAGCGCAAAGATAATAGTGGCTTGCTCATCTGGGGGTACCATGAAACCGTCCCAAAACCTCCCTGAAGGCCAGCAGTCAAGGTCACTGATAGCAGCCTACTTACTTGTCCTCAATGGTTACACCAATGTCTTTCACTTAGAAGGGGGACTCTACACATGGTTCAAAGAAGGCTTGCCATCAGTTTCAGAAGAATGA 702 0.4601 MAALASITPHSSSSLHPKSHLSSNTSHHSISSYCVTRSVRTNRQRLYSESGSRGLKIQSAATKPAKSPAEEDWKIKREVLLEKKVRSVDAKEALRLQQENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFMQSVESKIDKSAKIIVACSSGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYTWFKEGLPSVSEE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1298 233 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 12 232 IPR043186 -
Vvi16g1298 233 Pfam Rhodanese-like domain 90 223 IPR001763 -
Vvi16g1298 233 CDD RHOD 92 222 - -
Vvi16g1298 233 MobiDBLite consensus disorder prediction 1 27 - -
Vvi16g1298 233 Gene3D - 83 232 IPR036873 -
Vvi16g1298 233 ProSiteProfiles Rhodanese domain profile. 98 231 IPR001763 -
Vvi16g1298 233 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 81 230 IPR036873 -
Vvi16g1298 233 MobiDBLite consensus disorder prediction 47 69 - -
Vvi16g1298 233 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 72 230 - -
Vvi16g1298 233 SMART rhod_4 88 228 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1298 1 228 Sulfurtransferasese or Rhodanese AT4G27700 69.869 1.77e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1298 - - vvi:100245212 439.113