Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1293 ATGGCATCAGATCCGAAGATTCACTTGTTCGAAGAGGTCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTTTGCTATCAGCAACTGGGAAGGATGCGACAAATGATTTTGAAGATGTAGGCCACAGTGATGCAGCCAGAGACATGATGGAAAAATACTACATTGGTGAGATCGATCCCTCAAGCGTTCCTCTAAAACGGACTTTCATTCCAGCCCAGCAAGCCGCCTACAATCATGATAAGACCTCTGAATTTGTGATTAAGATTTTACAATTCCTTGTGCCCCTGTTGATCTTGGGCTTAGCCTTTGTGGTTCGACAATACACCAAAAAGGAATAG 405 0.4395 MASDPKIHLFEEVAKHNQTKDCWLVISGKVYDVTPFMDDHPGGDEVLLSATGKDATNDFEDVGHSDAARDMMEKYYIGEIDPSSVPLKRTFIPAQQAAYNHDKTSEFVIKILQFLVPLLILGLAFVVRQYTKKE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1293 134 SMART Cyt_b5_2 8 81 IPR001199 -
Vvi16g1293 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 88 IPR036400 -
Vvi16g1293 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vvi16g1293 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vvi16g1293 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vvi16g1293 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vvi16g1293 134 FunFam Cytochrome b5 type B 2 85 - -
Vvi16g1293 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Vvi16g1293 134 Gene3D - 1 86 IPR036400 -
Vvi16g1293 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vvi16g1293 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vvi16g1293 134 PANTHER CYTOCHROME B5 4 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1293 Vvi-Chr16 21471080 21473217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1293 1 134 NADPH P450 reductases AT5G53560 79.851 3.19e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1293 K23490 - vvi:100265799 275.018