Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1286 ATGAGGCAGCACCATGATCCAGAACTCATCACCAACACTCATCATGAAATGCTCACTACAGTTCTTGGAAGCAAAGAAGCATCTGTAGATTCCATGCTCTACAGTTACAGACATGGCTTCTCCGGCTTTGCAGCCAAGTTGACAGAAGCTCAAGCACAAGCAGTTTCAGAGTTACCTGATGTGGTTCAAGTCATGCCCTCCCGCCTTCATAAGCTGAAGACAACAAGGAGCTGGGATTACCTTGGCCTCTCCTCTTCACATTCTTCCACCAATCTCCTGCATGAAACCAACATGGGTGATGGAATCATCATTGGTCTTCTTGACTCAGGGATCTGGCCCGAATCAAAAGTTTTCAGCGATAAAGGTCTGGGGCCAATCCCGTCTAGATGGAAAGGTGGCTGCAGCTCAGGGCAGAGCTTCAATGCAACAAAGCACTGCAACAGAAAACTTATTGGAGCTCGTTATTTCTTAAAGGGACTTGAAGCAGAGATTGGAGAGCCATTGAATACCACTGAATACCTAGAATACTTGTCCCCGAGAGACGCACTTGGACATGGTACACATACATCTTCTATTGCTGGTGGTTCTCCTGTGGTCAATGCCAGCTACTATGGGCTTGGTTTTGGAACAGTGAGGGGTGGCGCACCTGGGGCTCGGCTGGCCATGTATAAAGCGTGCTGGAATTTGGGCGGGGGATTCTGCTCAGATGCTGATATACTGAAAGCTTTTGACAAAGCCATCCACGACGGAGTAGATGTGTTATCAGTTTCACTCGGTTCCGACGACATCCTGTTCACTGAAATTATCAAACCTGATAGCATCCTCATTGGTTCATTCCATGCTGTGGCACAGGGGATTTCGGTTGTTTGTGCAGCAGGAAATGGAGGCCCAAGTGCTCAAACAGTAGATAATACAGCACCGTGGATATTAACTGTAGCAGCTAGCAGCATTGATCGGTCCTTCCCTACACCCATCACACTAGGCAACAACCGCACCGTCATGGGTCAAGCCATGCTCATTGGAAACCATACAGGCTTCGCCAGCTTAGTGTACCCAGATGACCCACATGTCGAGAGTCCTAGCAATTGTCTATCTATATCACCGAATGACACTTCAGTGGCTGGAAAGGTGGCGCTCTGCTTCACTTCAGGTACATTTGAGACACAATTTGCTGCATCTTTCGTGAAAGAAGCTCGTGGCCTGGGGGTAATTATTGCTGAGAATTCTGGAAACACCCAGGCATCATGCATCAGTGACTTCCCATGTATTAAAGTAAGCTACGAAACTGGAAGCCAGATACTCCACTACATCAGTTCGACCAGGCATCCCCATGTAAGCCTGAGCCCTTCTAAAACACATGTTGGGAAACCCGTGCCAACCAATGTGGCCTACTTCTCATCTCGAGGGCCAAGTTTCCCTAGTCCAGCAGTATTGAAGCCAGATATAGCAGGTCCAGGTGCCCAAATACTTGGGGCAGTTCCACCTTCTGATCTGAAAAAGAACACCGAATTTGCTTTCCATTCTGGAACATCCATGGCAACTCCTCACATTGCAGGCATTGTTGCACTACTCAAATCCCTGCACCCACATTGGTCCCCAGCTGCAATTAAATCAGCAATTGTCACAACAGGATGGACAACTGATCCGTCTGGAGAACCAATCTTTGCCGAGGGAGATCCAACAAAGCTCGCTGATCCATTTGATTTTGGAGGTGGAATTGTGAATCCGAATAGAGCAGCGGATCCTGGTCTAGTGTATGACATGGGTACAGCGGATTATATTCATTATCTCTGTACCTTGGGCTACAACAACTCTGCCATTTTTCAGTTCACAGAACAATCCATACGCTGCCCCACTGGGGAGCATTCTATTCTTGACTTGAATCTTCCTTCCATAACCATCCCAAGCCTCCAAAATTCAACCTCCCTCACCAGAAATGTCACAAATGTTGGAGCTGTCAACTCCACGTACAAAGCCTCTATCATATCCCCAGCAGGCATAACCATAACAGTAAAACCTGATACTTTGATTTTTGACTCTACCATCAAAACTGTTACCTTCAGTGTCACAGTTTCCTCAATTCACCAGGTGAACACAGGATACTCTTTTGGGAGCTTGACTTGGATTGATGGGGTGCATGCAGTGAGAAGTCCCATATCTGTGAGAACTATGATCGAAGAATCTTCTGCTAATGACAGCTAA 2202 0.4709 MRQHHDPELITNTHHEMLTTVLGSKEASVDSMLYSYRHGFSGFAAKLTEAQAQAVSELPDVVQVMPSRLHKLKTTRSWDYLGLSSSHSSTNLLHETNMGDGIIIGLLDSGIWPESKVFSDKGLGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFLKGLEAEIGEPLNTTEYLEYLSPRDALGHGTHTSSIAGGSPVVNASYYGLGFGTVRGGAPGARLAMYKACWNLGGGFCSDADILKAFDKAIHDGVDVLSVSLGSDDILFTEIIKPDSILIGSFHAVAQGISVVCAAGNGGPSAQTVDNTAPWILTVAASSIDRSFPTPITLGNNRTVMGQAMLIGNHTGFASLVYPDDPHVESPSNCLSISPNDTSVAGKVALCFTSGTFETQFAASFVKEARGLGVIIAENSGNTQASCISDFPCIKVSYETGSQILHYISSTRHPHVSLSPSKTHVGKPVPTNVAYFSSRGPSFPSPAVLKPDIAGPGAQILGAVPPSDLKKNTEFAFHSGTSMATPHIAGIVALLKSLHPHWSPAAIKSAIVTTGWTTDPSGEPIFAEGDPTKLADPFDFGGGIVNPNRAADPGLVYDMGTADYIHYLCTLGYNNSAIFQFTEQSIRCPTGEHSILDLNLPSITIPSLQNSTSLTRNVTNVGAVNSTYKASIISPAGITITVKPDTLIFDSTIKTVTFSVTVSSIHQVNTGYSFGSLTWIDGVHAVRSPISVRTMIEESSANDS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1286 733 CDD PA_subtilisin_like 325 443 - -
Vvi16g1286 733 Gene3D - 597 725 - -
Vvi16g1286 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi16g1286 733 ProSiteProfiles Serine proteases, subtilase domain profile. 77 580 - -
Vvi16g1286 733 FunFam Subtilisin-like protease SBT1.5 101 330 - -
Vvi16g1286 733 FunFam Subtilisin-like protease SBT5.3 1 73 - -
Vvi16g1286 733 Pfam Fibronectin type-III domain 626 721 IPR041469 -
Vvi16g1286 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 721 IPR045051 -
Vvi16g1286 733 CDD Peptidases_S8_3 70 545 IPR034197 -
Vvi16g1286 733 Pfam Subtilase family 99 544 IPR000209 GO:0006508|GO:0008236
Vvi16g1286 733 Pfam Peptidase inhibitor I9 7 69 IPR010259 -
Vvi16g1286 733 FunFam p69E protein-like 597 724 - -
Vvi16g1286 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 509 519 IPR023828 -
Vvi16g1286 733 FunFam subtilisin-like protease SBT1.5 318 454 - -
Vvi16g1286 733 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Vvi16g1286 733 PRINTS Subtilisin serine protease family (S8) signature 99 118 IPR015500 -
Vvi16g1286 733 PRINTS Subtilisin serine protease family (S8) signature 181 194 IPR015500 -
Vvi16g1286 733 Gene3D - 318 454 - -
Vvi16g1286 733 Gene3D Peptidase S8/S53 domain 101 593 IPR036852 GO:0004252|GO:0006508
Vvi16g1286 733 SUPERFAMILY Subtilisin-like 73 584 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1286 Vvi-Chr16 21420087 21423229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1286 2 733 Subtilisin-like Serine Gene Family AT1G32960 57.143 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1286 - - vvi:100264034 1462.59