Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1266 ATGCATAGTAATTACATAATGATCCTTCTCGTCTCAGTAAGTTGGGCACCAGATGGTGCATCTCATCTTTACAAAAATCATCATCTCGACAAAAAAACATCTTCTTTCATCTTGATTCTAAACGAGAAAGTTAGCTCGGTATCTCCTGCACAACCTAAAAGCAAGGTCCACATTGTTTATTTGGGAAAGAGGCAGCACCATGATCCAGAACTCATCACCAACATTCATCATGAAATGCTAACTACAGTTCTTGGAAGCAAAGAAGCATCTGTAGATTCCATGATCTACAGTTACAGACATGGCTTCTCTGGATTTGCAGCCAAGTTGACAGAAGCTCAAGCACAAGCAGTTTCAGAGTTACCTGGTGTGGTTCAAGTCATGTCCTCTCGCCTTCATAAGCTGAAGACAACAAGGAGCTGGGATTACCTTGGCCTCTCCTCTTCACATTCTTCCACCAATCTCCTGTATGAAACCAACAACGGTGATGGAATCATCATTGGCCTTCTTGACACAGGGATATGGCCCGAATCAGAAGTTTTCAGCGATAAAGGTCTGGGGCCAATCCCGTCTAGATGGAAAGGTGGCTGCAGCTCAGGACAGAGCTTCAATGCAACAAAGCACTGCAACAGAAAACTTATTGGAGCTCGTTATTTCTTCAAGGGACTTGAAGCAGAGATTGGAGAGCCATTGAATACCACTGAATACCTAGAATACCTGTCCCCGAGAGACGCACTTGGACATGGTACACATACATCTTCTATTGCTGGTGGTTCTCCTGTGGTCAATGCCAGCTACTATGGGCTTGGTTTTGGAACAGTGAGGGGTGGCGCACCTGGGGCTCGGCTGGCCATGTATAAAGTGTGCTGGAATTTGGAGGGGGGATTCTGCTCAGATGCTGATATACTGAAAGCTTTTGACAAAGCCATCCACGACGGAGTAGATGTGTTATCAGTCTCACTCGGTTCCGACGACATCCCGTTCACTGAAATTATCAAACCTGATAGCATCCTCATTGGTTCATTCCATGCTGTGGCACAGGGGATTTCAGTTGTTTGTGCAGCAGGAAATGGAGGCCCAAGTGCTCAAACAGTAGAGAATACAGCACCGTGGATATTAACTGTAGCAGCTAGCAGCATTGATCGGTCCTTCCCTACACCCATCACACTAGGCAACAACCGCACCGTCATGGGTCAAGCCATGCTCATTGGAAACCTTACAGGCTTCGCTAGCTTAGTGTACCCAGATGACCCACATCTCCAGAGTCCTAGCAGTTGTCTATATATGTCACCGAATGACACTTCAGTGGCTGGAAAAGTGGCGCTCTGCTTCACTTCAGGTACATTTGAGACACAATTTGCTGCATCTTTCGTGAAAGAAGCTCGTGGCCTGGGGGTAATTATTGCTGAGAATTCTGGAAACACCCAGGCGTCATGCATCAGTGACTTCCCATGTATTAAAGTAAGCTACGAAACTGGAAGCCAGATACTCTACTACATCAGTTCGACCAGGCATCCCCATGTAAGGCTGAGCCCTTCTAAAACACATGTTGGGAAACCCGTGCCAACCAATGTGGCCTACTTCTCATCTCGAGGGCCAAGTTTCCCTAGTCCAGCAGTATTGAAGCCAGATATAGCAGGTCCAGGTGCCCAAATACTTGGGGCAGTTCTACCTTCTGATCTGAAAAAGAACACCGAATTTGCTTTCCATTCTGGAACATCCATGGCAACTCCTCACATTGCAGGCATTGTTGCACTACTCAAATCCCTGCACCCACATTGGTCCCCAGCTGCAATTAAATCAGCAATTGTCACAACAGGATGGACAACCGATCCGTCTGGAGAACCAATCTTTGCCGAGGGAGATCCAACAAAGCTTGCTGATCCATTTGATTTTGGAGGTGGAATTGTGAATCCGAATAGAGCAGCGGATCCTGGTCTAGTGTATGACATGGGTACAGCGGATTATATTCATTATCTCTGTACCTTGGGCTACAACAACTCTGCCATTTTTCAGTTCACAGAACAATCCATACGCTGCCCCACTCGAGAGCATTCTATTCTTGACTTGAATCTTCCTTCCATAACCATCCCAAGCCTCCAAAATTCAACCTCTCTCACCAGAAACGTCACAAATGTTGGAGCTGTCAACTCCACATACAAAGCCTCTATCATATCCCCAGCAGGCATAACCATAACAGTAAAACCTGATACTTTGATTTTCAACTCCACCATCAAAACTGTTACCTTCAGTGTCACAGTTTCCTCAATTCACCAGGTGAACACAGAATACTCTTTTGGGAGCTTGACTTGGGTTGATGGGGTGCATGCAGTGAAAAGTCCCATATCTGTGAGAACTATGATCGAAGAATCTTATGCTAATGACAGCTAA 2388 0.4594 MHSNYIMILLVSVSWAPDGASHLYKNHHLDKKTSSFILILNEKVSSVSPAQPKSKVHIVYLGKRQHHDPELITNIHHEMLTTVLGSKEASVDSMIYSYRHGFSGFAAKLTEAQAQAVSELPGVVQVMSSRLHKLKTTRSWDYLGLSSSHSSTNLLYETNNGDGIIIGLLDTGIWPESEVFSDKGLGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFFKGLEAEIGEPLNTTEYLEYLSPRDALGHGTHTSSIAGGSPVVNASYYGLGFGTVRGGAPGARLAMYKVCWNLEGGFCSDADILKAFDKAIHDGVDVLSVSLGSDDIPFTEIIKPDSILIGSFHAVAQGISVVCAAGNGGPSAQTVENTAPWILTVAASSIDRSFPTPITLGNNRTVMGQAMLIGNLTGFASLVYPDDPHLQSPSSCLYMSPNDTSVAGKVALCFTSGTFETQFAASFVKEARGLGVIIAENSGNTQASCISDFPCIKVSYETGSQILYYISSTRHPHVRLSPSKTHVGKPVPTNVAYFSSRGPSFPSPAVLKPDIAGPGAQILGAVLPSDLKKNTEFAFHSGTSMATPHIAGIVALLKSLHPHWSPAAIKSAIVTTGWTTDPSGEPIFAEGDPTKLADPFDFGGGIVNPNRAADPGLVYDMGTADYIHYLCTLGYNNSAIFQFTEQSIRCPTREHSILDLNLPSITIPSLQNSTSLTRNVTNVGAVNSTYKASIISPAGITITVKPDTLIFNSTIKTVTFSVTVSSIHQVNTEYSFGSLTWVDGVHAVKSPISVRTMIEESYANDS* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1266 795 Pfam Subtilase family 161 606 IPR000209 GO:0006508|GO:0008236
Vvi16g1266 795 FunFam Subtilisin-like protease SBT5.3 45 135 - -
Vvi16g1266 795 Gene3D Peptidase S8/S53 domain 163 655 IPR036852 GO:0004252|GO:0006508
Vvi16g1266 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 783 IPR045051 -
Vvi16g1266 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 41 135 IPR037045 -
Vvi16g1266 795 CDD Peptidases_S8_3 132 607 IPR034197 -
Vvi16g1266 795 Gene3D - 659 787 - -
Vvi16g1266 795 ProSiteProfiles Serine proteases, subtilase domain profile. 139 642 - -
Vvi16g1266 795 PRINTS Subtilisin serine protease family (S8) signature 243 256 IPR015500 -
Vvi16g1266 795 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Vvi16g1266 795 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Vvi16g1266 795 FunFam subtilisin-like protease SBT1.5 380 516 - -
Vvi16g1266 795 Pfam Fibronectin type-III domain 688 783 IPR041469 -
Vvi16g1266 795 FunFam p69E protein-like 659 786 - -
Vvi16g1266 795 SUPERFAMILY Subtilisin-like 135 646 IPR036852 GO:0004252|GO:0006508
Vvi16g1266 795 CDD PA_subtilisin_like 387 505 - -
Vvi16g1266 795 Gene3D - 380 516 - -
Vvi16g1266 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Vvi16g1266 795 FunFam Subtilisin-like protease SBT1.5 163 392 - -
Vvi16g1266 795 Pfam Peptidase inhibitor I9 56 130 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1266 Vvi-Chr16 21257487 21263758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1266 50 795 Subtilisin-like Serine Gene Family AT1G32960 57.332 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1266 - - vvi:100264034 1454.5