Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g1162 | ATGAGAGGGGGCCGAGGTGAGTGCCCGACATCAAATCGTTGTGGCGACCAGGGTCCACTCATCCAGTTCCCTTTCCGTCTAAAAGGCCAGCCACACCACTGTGGATACCCGAGATTTGTTTTATCTTGCACTGAGAATAATCAGATCATGCTGGAGCTGCCAGATTCGGTAAAGCTCTTGGTGAAGAATATAATCTACAAATCCAGGGAAATCATTGTCCAGAACCCTGATAATTGCCTTGAGAGACAGCTTCGAAACCTTAGTTTAGCTTCGTCCCCCTTCCAGTTCAAATTTGAGGGGGACGTCACCTTCTTCAATTGTTCCTCACTTAAAACGGCAGAATCATTTGCTGCTCACTTCAGTTCAAATCTAAAACGGCAGAATCATTTGTTCCGAAATCAATATGTGGAAGCTGCCTACGAGGAGGACACATATGCAGACTGA | 444 | 0.4617 | MRGGRGECPTSNRCGDQGPLIQFPFRLKGQPHHCGYPRFVLSCTENNQIMLELPDSVKLLVKNIIYKSREIIVQNPDNCLERQLRNLSLASSPFQFKFEGDVTFFNCSSLKTAESFAAHFSSNLKRQNHLFRNQYVEAAYEEDTYAD* | 148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g1162 | 147 | Pfam | Wall-associated receptor kinase galacturonan-binding | 8 | 73 | IPR025287 | GO:0030247 | |
Vvi16g1162 | 147 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 7 | 116 | IPR046948 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi16g1162 | Vvi-Chr16 | 20224399 | 20224842 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi16g1162 | 10 | 107 | C3H Transcription Factor Family | AT2G46495 | 37.374 | 9.35e-16 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g1162 | - | K00103 | vvi:104882232 | 308.145 |