Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1097 ATGTCTGACGGTCTCGCTGTGCTACATGCTCTTGATTCAGCTCGAACACAATGGTACCACATCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGCATCTCCACCGTCTCCAAACTCCTCGGCCGCCTTTACTACTATGACCCCACTAAAGATAAGCCTGGGAAGCTCCCCCACGGTGTTAACAACTTTGTGATTGGGGTTGCCCTAGTAGGAACCCTATCAGGCCAACTAGTATTTGGTTGGCTTGGTGACAAACTTGGCCGGAAAAAAGTTTATGGCATGACTCTCATTCTTATGTCCATTTGTGCCATCTGCTCTGGCCTATCCTTCGGCTTCAGCAATAAATCTGTAATCACTACACTTTGTTTCTTCAGATTCTGGCTAGGGTTTGGAATTGGAGGTGACTATCCTCTCTCCGCAACGATCATGTCGGAGTATGCAAATAAAAAAACTCGTGGGGCTTTTATTGCAGCCGTGTTTGCTATGCAGGGCGTGGGGATCGTTTTTGCAGGGCTGGTTTCCATGATTCTCTCGAAGCTCTTTCTCCTCAAGTATGAGACTGTGCCATTCAGTGAGGAACCTATACTTTCTACACAACCTGAGGCAGATTATCTATGGCGGATCGTGCTGATGCTTGGAGCCTTGCCTGCGCTTTTAACATACTATTGGAGAATGAAGATGCCGGAGACCGGTCGGTACACTGCCCTTATTGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTAGGGTTCTTGAGATTGAAATCCAAGCTGAAGCAGATAAAGTGGCAGAGTTTAAGGCTGCTAACGAGTACTCATTATGGTCGAGAGAGTTCTTTGATCGCCATGGGCGTCACCTGATAGGCACAATGAGCACCTGGTTCTTGTTGGACATAGCCTTCTACAGCCAAAACCTAACTCAGAAGGATATTTTTCCGGCGATGAACCTGGTAAAGAAAGATTATGAAGTCAGTGCTCTCCGGGAAATGTTCGAGACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATACTGGTTCACAGTTTTCTTCATTGACCGGATTGGCCGATTCATCATCCAGCTTGTGGGGTTCTTCATGATGTCCTTATTCATGCTGATAATAGGAATCAAGTACGAATACCTCAGGGACGATAATAAATGGCTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTCGCCAATTTCGGTCCAAACAGCACAACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATGAGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACTTTGGATGGTAAAGCTAATGAAATTAGGATAGCCATGATAACCATGGCCTGTACAAACATGCTAGGGTTCTTCTGCACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTCGAGGAAATATCAGGCGAGGATGGAGGTATTAATGAAACCGAGATGGCTAGCAGACCATCTTAA 1554 0.4801 MSDGLAVLHALDSARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPTKDKPGKLPHGVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGMTLILMSICAICSGLSFGFSNKSVITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGIVFAGLVSMILSKLFLLKYETVPFSEEPILSTQPEADYLWRIVLMLGALPALLTYYWRMKMPETGRYTALIEGNAKQAAADMGRVLEIEIQAEADKVAEFKAANEYSLWSREFFDRHGRHLIGTMSTWFLLDIAFYSQNLTQKDIFPAMNLVKKDYEVSALREMFETSRAMFVVALLGTFPGYWFTVFFIDRIGRFIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRIAMITMACTNMLGFFCTFLVTETKGRSLEEISGEDGGINETEMASRPS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1097 517 FunFam Inorganic phosphate transporter 1-6 19 514 - -
Vvi16g1097 517 Gene3D MFS general substrate transporter like domains 19 515 IPR036259 -
Vvi16g1097 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 494 IPR020846 GO:0022857
Vvi16g1097 517 CDD MFS_PhT 24 493 - -
Vvi16g1097 517 Pfam Sugar (and other) transporter 24 501 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi16g1097 517 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 19 498 - -
Vvi16g1097 517 SUPERFAMILY MFS general substrate transporter 11 501 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1097 Vvi-Chr16 19309225 19310778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1097 5 503 Inorganic Solute Cotransporters AT5G43360 61.404 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1097 K08176 - vvi:100253597 1028.85