Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1096 ATGTCTAACAGTCTTGCTGTGCTACATGCCCTTGATTCAGCCAGAACACAATGGTACCACATCACCGCCATCATCATCGCCGGCATGGGCTTCTTCACCGACGCCTATGACCTCTTCTGCATCTCCACCATCTCCAAACTCTTGGGCCGTCTCTACTACTACGACCCTGTTGGCAGCCCTGAAAAGCCCGGCAAGCTCCCCCACAACGTCAATAATGCCGTTGTCGGTGTTGCCCTGTTCGGAACCCTAACAGGACAGTTGGTGTTTGGCTGGTTGGGGGACAAGCTCGGCCGGAAAAGAGTTTATGGCTTCACTCTCATTCTTATGGTTGTTTGTGCTATTTGCTCCGGTCTGTCATTTGGGTATAGCCCAAAAGCTGTAATCATTACACTTTGTTTCTTCAGGTTCTGGCTAGGGTTTGGGATTGGTGGAGACTATCCCCTTTCCGCGACGATCATGTCGGAGTATGCGAATAAAAAGACTCGTGGGGCTTTTATTGCGGCAGTGTTTGCTATGCAGGGCATGGGGATCATTTTTGCGGGGCTGGTTTCCATGATTCTCTCGAAGCTCTTCCTCCTCAAGTATGAGACTGTGTCATTCAGAGAGGATCCTGTGCGTTCTACCCAACGTGAGGCGGATTTTCTGTGGCGGATCGTGCTGATGCTCGGAGCCTTGCCGGCACTTTTAACGTACTACTGGAGAATGAAGATGCCGGAAACTGGTCGGTACACTGCCCTTATAGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTCGGGTTCTTGAGATTGAAATCCAAGAGGAAGCAGATAAAGTGGCAGAGTTTAAGGCTGCTAACGAGTACTCATTATGGTCGAGAGAGTTCTTTGATCGCCATGGGCTTCACCTGATAGGCACAATGAGCACCTGGTTCTTGTTGGACATAGCCTTCTACAGCCAAAACCTAACTCAGAAGGATATTTTTCCGGCGATGAACCTGGTAAATAAAGATTATCAAGTCAGTGCACTCCGGGAAATGTTCGAGACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATATTGGTTCACAGTTTTCTTCATTGAACGGATTGGCCGATACATCATCCAGCTTGTGGGGTTCTTCATGATGTCCTTATTCATGCTGATCATAGGAATCAAATACGAATACCTCAGGGACGATAATAAATGGCTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTTGCCAATTTCGGTCCAAACAGCACAACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATGAGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACTTTGGATGGTAAAGCTAATGAAATTAGGGTAGCCATGATAACCATGGCCTGTACAAATATGCTAGGGTTCTTCTGTACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTGGAGGAAATATCAGGCGAGGATGGAGACAAATTCCAAGGAATAAGAGGTGCTTATGATTACATGAATCTGCAAGCACTTGTAGCCAAGGAAGTGGCTTTTTTCAATGCAATGTACAGAATTTGTATGAGTGATGATTGA 1635 0.4832 MSNSLAVLHALDSARTQWYHITAIIIAGMGFFTDAYDLFCISTISKLLGRLYYYDPVGSPEKPGKLPHNVNNAVVGVALFGTLTGQLVFGWLGDKLGRKRVYGFTLILMVVCAICSGLSFGYSPKAVIITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGMGIIFAGLVSMILSKLFLLKYETVSFREDPVRSTQREADFLWRIVLMLGALPALLTYYWRMKMPETGRYTALIEGNAKQAAADMGRVLEIEIQEEADKVAEFKAANEYSLWSREFFDRHGLHLIGTMSTWFLLDIAFYSQNLTQKDIFPAMNLVNKDYQVSALREMFETSRAMFVVALLGTFPGYWFTVFFIERIGRYIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRVAMITMACTNMLGFFCTFLVTETKGRSLEEISGEDGDKFQGIRGAYDYMNLQALVAKEVAFFNAMYRICMSDD* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1096 544 FunFam Inorganic phosphate transporter 1-6 19 515 - -
Vvi16g1096 544 Pfam Sugar (and other) transporter 25 503 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi16g1096 544 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 19 500 - -
Vvi16g1096 544 CDD MFS_PhT 24 495 - -
Vvi16g1096 544 SUPERFAMILY MFS general substrate transporter 11 503 IPR036259 -
Vvi16g1096 544 Gene3D MFS general substrate transporter like domains 19 517 IPR036259 -
Vvi16g1096 544 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 496 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1096 Vvi-Chr16 19301911 19303838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1096 3 504 Inorganic Solute Cotransporters AT2G38940 59.029 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1096 K08176 - vvi:100258742 1009.59