Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1078 ATGGACAACATCTCTCGGCATTTTACTGCTAACTTTACCTCAGCTTCATCCAAGCATCCAGGCATTTTTGGTGATCCAGTAGCTAGTTATCCTGCAGACACAGCCTTAAGACTTGATCTGCCAGGTGTTCCATATCCTTATCTCCTAAACTCAAAGGGAGCCAAGAGGAAATTCGACACAATTGATGGACCCAGGAGGTTGCAGGATGGCTCTTCCCTTGTTTTTGGATTAGGCCATTCATCGAGTTCCTCAGATAGCAAGGGGAGTTCAGCAACTGCTTGCACTACCATTTCCTCAATGAAAGAAACTGAGGATGACTTTTTGATGGATCTTAATCTAGACTTCAATCTCCATATTGGTAAGGAGAGGACCCTTAATCCAAAGAAGAATTTCCATTCAACCCCCAAGGGACTGGAAGTGGAAAAACCTAAGCTTGACCTTGTACTAAGTCTGTCAAGTGGGTATGCTGAATCTGATATTACCAGTGTTACCCCTGATTCTGGTCCATTTCAGAGTAACGTAGAGATGCCAGTCACACCTAGCACAGTTGAACTTGTTGATGAAGGATCGACATCACTTAGATGGAAAAGAAGGCATTTTCTGCCTCCATTGCATCCTCTGCAAAATACGGATACCGCTGCTGGTTTTATCCCTTGTGCTGTCCATACTGATCCAACTCCAGTTGCTCTGAGCCTTCCACCAACTGTGATAGTAATGCCTGAAAGTTCAGTGTCCTCTGCTCTTGAGACTACAAATGGACAACAGCAACGCAGCACTAGTGTAAAAACCTGTCAGGTTGAGGGATGCTGGAGAGGAGCAAGGGGTGCTTCTGGTCGTTGTATTGCCCATGGTGGTGGTCGTAGATGTCATAGAATTGGCTGTCAGAAGGGAGCTGAAGGCAAGACTGTATTCTGCAAAGCCCATGGGGGTGGGCGAAGATGCCAACATCTTGGGTGCACAAAGAGTGCTGAAGGCCGCACTGACCTCTGTATCGCCCATGGCGGTGGCAAGAGGTGTAGTAGTGAGGGTTGCATCCGTGCTGCAAGAGGGAAATCCGGCTTGTGCATTCGTCATGGAGGCGGCAAGAGATGCCGGATGGAAAATTGCACAAGGAGTGCAGAGGGATTCTCTGGTCTCTGCATTTCTCATGGAGGTGGTCGCCGCTGCCAGTATCCAGAATGCACAAAAGGTGCTCAGGGGAGCACAATGTTCTGCAAAGCACATGGTGGGGGCAAAAGGTGCACAGCTCCAGGGTGCACAAAGGGTGCAGAAGGTAGTACACCATTCTGCAAGGGCCATGGAGGGGGGAAAAGGTGTACATTTCAAGGAGGTTGCACAAAGAGTGTGCATGGAGGTACCTTGTTTTGTGTAGCTCATGGTGGGGGCAAAAGATGTGCTATACCTGAATGTACCAAGAGTGCAAGGGGCCGGACGGCTTTCTGTGTTCGTCATGGTGGAGGGAAAAGGTGCAAATCTGAAGGGTGCGGAAAGAGTGCACAAGGCAGCACTGATTTTTGCAAGGCTCATGGTGGGGGAAGACGCTGCTCTTGGGGTGTGCCAGGATCAGGGTTTGGCGACCAAACTACCACTCCTTGTGATAAGTTTGCTAGGGGGAAAACTGGCCTTTGTGCTAATCACGGTGCTCAGGTGCAAGACAAACGGGTTCATGGTGGTAGCACACTTGATCCTACGCTGCAGGGACCAAAACCTAGGATGACTGGAAAGATGAAAAATATCGTCACTTCTGAAAACGTTGGTGCTGAGGTAATGACAACAGTAGGCAGCGGAGGGAAGTTGTTGGGTGTTAATTATTTTGGTTCACCAGGCTTTGGACATTCTATGCAGATGCCAACCCAGGACAATGCTGGTCCAGTTCAAATTTCACTCCCAGAAGGCCGGGTTCATGGGGGAAGCCTTATGGCAATGCTTAGAGGTGGTATTGGTGGTGTCGGGGCGGCAAGCAGCAGTAATCAGGCTGTCTGTTGCCCATCGGTGCAAGGAAAATCATACACTCTGCCCCTTGGTTGGATGGCAAGTAGTGGTAACCAATCAGTTGGTGGTCCATCAGGAGGAGGAAAATCTTACCCTGTTCCCCATGGTTGGATGTAA 2109 0.4927 MDNISRHFTANFTSASSKHPGIFGDPVASYPADTALRLDLPGVPYPYLLNSKGAKRKFDTIDGPRRLQDGSSLVFGLGHSSSSSDSKGSSATACTTISSMKETEDDFLMDLNLDFNLHIGKERTLNPKKNFHSTPKGLEVEKPKLDLVLSLSSGYAESDITSVTPDSGPFQSNVEMPVTPSTVELVDEGSTSLRWKRRHFLPPLHPLQNTDTAAGFIPCAVHTDPTPVALSLPPTVIVMPESSVSSALETTNGQQQRSTSVKTCQVEGCWRGARGASGRCIAHGGGRRCHRIGCQKGAEGKTVFCKAHGGGRRCQHLGCTKSAEGRTDLCIAHGGGKRCSSEGCIRAARGKSGLCIRHGGGKRCRMENCTRSAEGFSGLCISHGGGRRCQYPECTKGAQGSTMFCKAHGGGKRCTAPGCTKGAEGSTPFCKGHGGGKRCTFQGGCTKSVHGGTLFCVAHGGGKRCAIPECTKSARGRTAFCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGRRCSWGVPGSGFGDQTTTPCDKFARGKTGLCANHGAQVQDKRVHGGSTLDPTLQGPKPRMTGKMKNIVTSENVGAEVMTTVGSGGKLLGVNYFGSPGFGHSMQMPTQDNAGPVQISLPEGRVHGGSLMAMLRGGIGGVGAASSSNQAVCCPSVQGKSYTLPLGWMASSGNQSVGGPSGGGKSYPVPHGWM* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1078 702 PANTHER EMB|CAB89363.1 262 299 - -
Vvi16g1078 702 MobiDBLite consensus disorder prediction 681 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1078 Vvi-Chr16 19158746 19160854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1078 387 547 WRKY Transcription Factor Family AT4G12020 54.037 1.12e-46 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1078 - - vvi:100241527 1404.81