Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0978 ATGGCGGTCGAAATCTCGGTTGCCACCTCCTCCCGCTCTCCCCGCTTGGGCCGGAACCCCTTTCTCGGCCCCAAACCCACCTCCCCCTTCACCCCCACTTCTCTCTTCATCCCTTCCATTCGGCGGCACGAAAACATTTTCCGGTGTCGGAAGAAGACAAGACTGACGGTTTGTTTCGTGGTGGAGGAGGAGAAGCTGAGCACAGAGGTGGTGGAGAATCGGAGCGAGGAGACTCTGGCGAGTCAGATCTCCGCCGCCCGGGTGGCGGAGAAGCTCGCCAGGAAGAGATCAGAGCGGCTAACGTACCTTGTTGCGGCTGTGATGTCGAGCTTTGGGATCACTTCCATGGCTGTTATGGCAGTTTACTACCGGTTTTCATGGCAAATGGAGGGCGGGGAGGTTCCCTTGTCCGAGATGTTCGGGACATTTGCTCTGTCGGTTGGAGCCGCTGTAAGCATGGAGTTCTGGGCGAGATGGGCTCACAAAGCTCTCTGGCACGCCTCCTTATGGCACATGCACGAGTCCCACCATAAACCAAGAGAAGGTCCATTCGAGCTCAACGATGTTTTCGCGATCACAAATGCAGTTCCAGCCATAGCCCTCCTCTCCTATGGCTTCTTCCACAAAGGCCTCGTCCCTGGTCTATGTTTTGGTGCAGGCCTTGGAATTACCGTGTTTGGAATGGCCTACATGTTTGTCCACGATGGTCTCGTCCACAGGAGATTTCCAGTGGGGCCCATTGCGAACGTGCCCTATTTCAGACGCGTAGCTGCAGCACACCAACTCCACCACTCAGACAAATTCAATGGGGTCCCATATGGGCTGTTCTTGGGCCCTAAGGAAGTGGAAGAGGTGGGAGGCAAGGATGAGTTGGAGAAAGAGATCAATCGCAGAGCCAGATTATCCAACGGTCCAAGATGA 921 0.5537 MAVEISVATSSRSPRLGRNPFLGPKPTSPFTPTSLFIPSIRRHENIFRCRKKTRLTVCFVVEEEKLSTEVVENRSEETLASQISAARVAEKLARKRSERLTYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEVPLSEMFGTFALSVGAAVSMEFWARWAHKALWHASLWHMHESHHKPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGKDELEKEINRRARLSNGPR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0978 306 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vvi16g0978 306 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Vvi16g0978 306 MobiDBLite consensus disorder prediction 8 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0978 Vvi-Chr16 18017218 18018829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0978 24 219 Chloroplast and Mitochondria Gene Families AT4G25700 64.851 3.07e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0978 K15746 - vvi:100268009 620.157