Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0937 ATGGCTTCAATTTCATCAAATTATGTCAAAGCCGATTCGAGTTCGTGGAACCCAAGTCGGAAAATTCGGATAGTCGGGAAAATCAGGGGTTTTACAGATCTTGAATCTCAATCCTCTACTGGGTTCTCAGGGCCGTGGATTTCGGTTGGCAAGCCTAATGGAGAATTCTCTGAGAGTGTGACTCTGTCCTTCGGAGACCACCCCACCAGTCGCAAGGAATCTTATGAGATAGATTATTGCTATGCACAAGATGAAGACAATGGCCTAATCTTCTCAAGAGAGATCAAACCTATGATTTCAAGGGTTTGCAATGGTCACACTGCATCTGTTATTGCATATGGAGCTAGAGGTAGTGGAAAGACATACACAATTCAGGGTTCTGATGAGAAACCGGGTTTAGCAGCACTAGCCATGACTGAACTTCTACAGATGGCTGGGGAAATTGGGAAATCAGTTTCTATATCTTCCTTTGAGGTTTACCAAGACCATGTTTATGATCTCTTGGATCCAAAACGGCCACCGGCTCCTGTGAACTCCATTTCAGAATTCTACAGATTATATTTTAATGGGTTTGGTTCACGTAAACCAGCTCAGAAGATACCAACCGAACTCCCTCGTAGGAGCCACAAGGGCTTAATGGTATATGTGTCATCTCAGAACTCGGAAACTAACCTCGTGGGCAAAATGAATTTTGTCGATTTGGCAGGTTATGAGGACACCAGAAAGAAGAGTGTTGATGGTCCCAACCTTATGGAGAATACAAAAATTAACAAGTCCTTATATGCCTTGCAGAATGTTGTTTATGCTTTGAGTGTCAATGAAAGCCATGTTCCATACCGAGAAAGCAAACTAACTCGCATGTTGCAGGATTCCTTTGGAGGGATGAACCAAATTTTGATGGTTACTTGCTTGAATCCATCTTTTTGCCAAGACACCATTTACTCTGTAAGTTTAGCTTCTCGGTCATATCAACGGGCTTTTACAAATTCCACAAAGAAAATCAAAAGTTCAGCAAAACCAACAGGCCTTTCTGCATTGAAGAATGGAAAACCCACTGGTGTTTCTTCTACTGTGAAGAAACAAACCAGCTCCCAAGTGCATTTCTCTGATAAGAAAGCCAATTTTACAGATTCTATAGTGAAAGGAAGGTATGTACTCGAGAATTCAATGCAGGCAGATTCCTCATCAAGCATTGCTTCAGTTATTGAACCTTCTTTACAGGAAGAGGTGAAGTCCATTTCAGATGTCTCTTTAGCCACAGTACCTTCAGAAGAGGAAAATTCATTATCAGTTGCTGTTACAGATACAGAACCTGTTTTTGTAGAAGAAAAGGTTTCTGCATACCATGATAATGACAATCATCCTGAAGTTACTTCTGGGAATAGCAGCACGACATTGGCTTTGATTGAAGAAGGTCACCATATAATAGAAGAAAAAGAGAACAAAAGCTTATTTGCAAATGGAAATGGATCGCCACCACTAAGTGCCAGATTACGAGAACTATCGAATAACCTGAAATCTCTGTACTCTTCAACTCCAGTATGCATAAAGCTCCCTGAGAATGATACTTCCTCCACTAACCAAGCTTCTGCTTTGGTGGAACCAAAAACTCCGGCCGTCGAAAAAAAATTGAGAGGGAATGATAAATGGGAGGTTGCAAACATTAGTAGTCCTTGGGAAGCACTCCACATGCACAGTTCTAGAATGAAGAAGTCACTTGTTGAAGAAACCCTCAAGTTTTTGAACAGTGCTAACAAGGAGGAGTTGAAAGGACTAAAGGGTATTGGAGAGAAAAGATCTACATACATTCTCGAACTTCGTCAAGAATCCCCTGAACCTTTCAAGAGTCTGGATGACTTAAAAGACATTGGTCTTTCAGAAAAGCAGATAAAAGGAATGATGAAGAAGGTAGTTGAAGAGGTTTTGAACTAG 1932 0.4099 MASISSNYVKADSSSWNPSRKIRIVGKIRGFTDLESQSSTGFSGPWISVGKPNGEFSESVTLSFGDHPTSRKESYEIDYCYAQDEDNGLIFSREIKPMISRVCNGHTASVIAYGARGSGKTYTIQGSDEKPGLAALAMTELLQMAGEIGKSVSISSFEVYQDHVYDLLDPKRPPAPVNSISEFYRLYFNGFGSRKPAQKIPTELPRRSHKGLMVYVSSQNSETNLVGKMNFVDLAGYEDTRKKSVDGPNLMENTKINKSLYALQNVVYALSVNESHVPYRESKLTRMLQDSFGGMNQILMVTCLNPSFCQDTIYSVSLASRSYQRAFTNSTKKIKSSAKPTGLSALKNGKPTGVSSTVKKQTSSQVHFSDKKANFTDSIVKGRYVLENSMQADSSSSIASVIEPSLQEEVKSISDVSLATVPSEEENSLSVAVTDTEPVFVEEKVSAYHDNDNHPEVTSGNSSTTLALIEEGHHIIEEKENKSLFANGNGSPPLSARLRELSNNLKSLYSSTPVCIKLPENDTSSTNQASALVEPKTPAVEKKLRGNDKWEVANISSPWEALHMHSSRMKKSLVEETLKFLNSANKEELKGLKGIGEKRSTYILELRQESPEPFKSLDDLKDIGLSEKQIKGMMKKVVEEVLN* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0937 643 PANTHER KINESIN-RELATED 68 494 IPR027640 GO:0003777|GO:0007018
Vvi16g0937 643 SUPERFAMILY RuvA domain 2-like 572 638 IPR010994 -
Vvi16g0937 643 MobiDBLite consensus disorder prediction 339 361 - -
Vvi16g0937 643 Pfam Kinesin motor domain 176 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 Pfam Kinesin motor domain 66 171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 ProSiteProfiles Kinesin motor domain profile. 21 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 FunFam Kinesin-like protein KIN-10C 567 641 - -
Vvi16g0937 643 Gene3D - 566 641 - -
Vvi16g0937 643 PRINTS Kinesin heavy chain signature 105 126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 PRINTS Kinesin heavy chain signature 277 298 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 PRINTS Kinesin heavy chain signature 228 246 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 SMART kinesin_4 19 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0937 643 Gene3D Kinesin motor domain 2 324 IPR036961 -
Vvi16g0937 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0937 Vvi-Chr16 17625001 17630168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0937 94 346 Calmodulin-binding Proteins AT5G65930 33.333 1.38e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0937 K10403 - vvi:100250822 1228.39