Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0927 ATGTCCAAGTTTGAGGTCTTTTCTGGAATTTTAAGCAATAATGCATCTCTAAATCCAGATTTTTACAATTGGAACCGGGTGAAGCTAAGATATTGTGATGGAGCCTCATTTGCTGGGGATGCCAAGTTTGACAATGGGACCTCAATACTCTACTTTAGAGGGCAGAAGATTTGGCGAGCAATAATTAATGATCTTCTCCCTAAAGGATTAAGCAAAGCAAAGAAGGCTTTACTTTCAGGTTGCTCTGCTGGAGGTCTAGCATCTTTTTTGCATTGTGACAACTTTACCAGCTTTCTACCACAAAATGCCAGTGTAAAATGCTTGAGTGATGCTGGATTTTTTCTTGATGAAAAAGACATAAGCTTGAACCACTCTATGAGGGCCTTCTATGAAGAACTCATTTCCCTGCAGGGGGTTGAAAAGAATCTACATGAAAACTGCACAAGTTCTCTCCATTATCCACATCTATGCCTCTTCCCACAGTATGCTTTGGAATTCATTAAGACACCCTTTTTTATCTTAAACTCAGCATATGATGTGTACCAATTTCATCATATATTGGTGCCACCTACTGCTGATTTGCATGGACGTTGGAATCGTTGCAAGCTAGATCCTGCGGCATGCAATCCAAACCAGCTAAGTATTTTGCAAGGTTTTAGGAAAGATATGCTTACAGCTTTGAACCAATTCTATACTTATTCAAGAAGAGGAGGGATGTTTATAAATTCATGCTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGCTGGCAATTGACTCCCCAAGGGTGAACAATAAGACTATCGCAGAAGCAATTGGTGACTGGTACTTTAGCAGAAGGATAACTAAAGAGATTGACTGTGCATATCCTTGTGACACCACTTGTCATAATCTTATACCATTGCCTTAG 912 0.3991 MSKFEVFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDAKFDNGTSILYFRGQKIWRAIINDLLPKGLSKAKKALLSGCSAGGLASFLHCDNFTSFLPQNASVKCLSDAGFFLDEKDISLNHSMRAFYEELISLQGVEKNLHENCTSSLHYPHLCLFPQYALEFIKTPFFILNSAYDVYQFHHILVPPTADLHGRWNRCKLDPAACNPNQLSILQGFRKDMLTALNQFYTYSRRGGMFINSCFAHCQSESQDTWLAIDSPRVNNKTIAEAIGDWYFSRRITKEIDCAYPCDTTCHNLIPLP* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0927 303 PANTHER NOTUM-RELATED 1 298 IPR004963 GO:0016787
Vvi16g0927 303 Pfam Pectinacetylesterase 1 281 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0927 Vvi-Chr16 17513133 17521083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0927 1 301 Carbohydrate Esterase AT5G23870 71.947 9.96e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0927 K19882 - vvi:100247339 625.55