Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0919 ATGGCTTTTCTTCATATGTTGCCTCAGGTTTTCTTCTCAGCCATGGGTCTCTTTCTTCTCTTTGTTTTATGGAGGGTTGTGTTCTCCTGCTGGATTTCTCCTAATCGGGTTTACCGAAGGATTAGGATGAACGGGCTTGAAGGCCCTCCTCCTAGTTTTCCTCTGGGAAATATTGATGAGATGAAGAAGGATAAGAGGAGTTCTTCTTCTGGGTATTCAGGGATCTCCCATGATATCCATTCAACTGTTTTTCCTTACTTTTCTCGCTGGACGAAGTCTTATGGGAAGGTGTTTATATACTGGCTGGGAACAGAGCCATTTTTGTACGTTGCAGACCCTGAATTCTTGAAGAGAATGTCTGCAGGAGTGTTGGGGAAGAGCTGGGGGAAGCCTTCTGTGTTTAAACATGACAGAGAGCCCATGTTTGGTAATGGTTTGATTATGGTTGAAGGCGATGAATGGGTCCGGCATCGACATGTTATCAGTCCTGCATTCTCTCCGGCCAACTTGAAGGCCATGGCAAGCTTAATGGTGGAGTCCACCACTAAAATGCTAGACATATGGAGCAGTCTAGTTGGCACCGGCATGCCTGAAATCGATGTGGAAAGCGAAATTTCCCATGCCGCCGGGGAGATTATCGCCAAGACCAGCTTTGGAATAAGCTTTGAAAGTGGTAGGAAGGTGTTTGACAAATTGAGAGCCATGCAAATCACTCTCTTCAAGTCCAACCGATATGTTGGTGTGCCTTTTAGCAAGCTAATGTGCCCTATACAATCCCTAAAGGCGAAAAGGCTAGGGAAGGAGATCGACGGTCTTCTTCTATCGATCATAGCTGACAGGAAGAAATCGAATAGTACAGCTACTCAGCAGGACCTCCTAGGGCTATTGCTCGCTGACAACCTCGTAGGTGGCCGCCTAGGGAAGATGCTAACGGCTCGAGAACTGGTCGATGAGTGCAAGACATTCTTCTTCGGGGGGCATGAGACCACGGCATTGGCACTCACTTGGACAATGCTACTTCTAGCCACTCATCCAGAGTGGCAAACCCAGTTGAGAGAGGAGATCAAAGAAGTAATTGGAGAAGGAGATCAGCTTGATTTCACCAAGCTTGGTGGGCTAAAGAAGATGTCTTGGGTGATGAATGAAGTTCTACGCCTATACTCCCCGGCCCCGAACGTACAGAGGCAAGTGAGGGAAGATATTCGCGTAGGCGACGTGACAGTCCTGAATGGAACCAACATGTGGATCGACGTGGTAGCCATGCACCATGACCCAACTCTGTGGGGAGACGACGTTTATGAATTTAAGCCGGAGAGGTTCAAGGATGATCCCCTATATGGTGGTTGCAAGCACAAGATGGGGTTTTTGCCGTTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACTACAATGGAGTACAAGGTCGTTCTAACCCTTATTCTCACTAGGTTTTCCTTCTCCCTCTCCCCCACTTATACCCATGCTCCTGCAACTTTGCTGTCCCTTAGAACTTCCTTTGGTTTGCCTGTCCTCCTCCAACCTCTGTAG 1554 0.4788 MAFLHMLPQVFFSAMGLFLLFVLWRVVFSCWISPNRVYRRIRMNGLEGPPPSFPLGNIDEMKKDKRSSSSGYSGISHDIHSTVFPYFSRWTKSYGKVFIYWLGTEPFLYVADPEFLKRMSAGVLGKSWGKPSVFKHDREPMFGNGLIMVEGDEWVRHRHVISPAFSPANLKAMASLMVESTTKMLDIWSSLVGTGMPEIDVESEISHAAGEIIAKTSFGISFESGRKVFDKLRAMQITLFKSNRYVGVPFSKLMCPIQSLKAKRLGKEIDGLLLSIIADRKKSNSTATQQDLLGLLLADNLVGGRLGKMLTARELVDECKTFFFGGHETTALALTWTMLLLATHPEWQTQLREEIKEVIGEGDQLDFTKLGGLKKMSWVMNEVLRLYSPAPNVQRQVREDIRVGDVTVLNGTNMWIDVVAMHHDPTLWGDDVYEFKPERFKDDPLYGGCKHKMGFLPFGFGGRMCVGRNLTTMEYKVVLTLILTRFSFSLSPTYTHAPATLLSLRTSFGLPVLLQPL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0919 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 500 - -
Vvi16g0919 517 SUPERFAMILY Cytochrome P450 74 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vvi16g0919 517 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0919 517 Pfam Cytochrome P450 83 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0919 Vvi-Chr16 17352540 17355619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0919 10 517 Cytochrome P450 AT5G52400 61.165 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0919 - - vvi:100253152 1013.83