Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0910 ATGATGGAAAGTCTTACTCTCACCGGATTGTTGAAACAGGTCGCCGGAGAATTCCCTTCCCGTCGAGCACTCTCCGTTTCCGGCAAGTTCGATCTCACCTACGCTCGCCTTCACCAACTTGTTGAAGGAGCGGCCTCTCTGATCCTCGCCGGTGGCGTTAAGGCTGGAGACGTCGTCGCTCTCACCTTCCCAAACACCGTTGAGTTCGTGATCATGTTTTTGGCTGTAATACGAGTACGAGCCACAGCTGCGCCTTTGAACTCAGCTTACACAGCAGACGAGTTCGAGTTTTACTTATCCGACTCGGAATCGAAGCTTCTCTTAACATCGCAAGAAGGAAACGAGGCAGCACAAGCCGCGGCTTCCAAGCTCAAAATCACACACGCCACGGCTTCCCTTACCGAAGCCGAAGCCCAGGTAAATCTATCCTTGATTCACTCCGAGCCGGACCCTCACTCGGTAGCCAAACTCGTGAACGAGCCATCCGACGTGGCACTTTTCTTGCACACTTCCGGCACGACGAGTCGACCCAAAGGAGTGCCACTGAGTCAACTCAACTTGGCCTCATCGGTTCAGAATATCAAATCGGTGTACAAACTCACCGAGTCAGACTCCACCGTCATCGTGCTTCCTCTCTTCCACGTTCACGGCTTACTCGCAGGTTTACTGAGTTCACTAGGCGCAGGAGCCGCCGTGACCCTACCCGCCGCTGGCCGATTCTCGGCTTCAACATTCTGGTCCGACATGCTCAAATACGATGCCACGTGGTACACCGCCGTCCCCACGATCCACCAAATTATCCTGGATCGCCACCTTAGCAAACCCGAACCCGTTTACCCGAAGCTTCGATTCATCCGGAGTTGCAGCGCTTCTCTGGCACCAGCCATAATGGCTCGGCTCGAGGAGGCGTTTGGTGCACCTGTGTTGGAAGCATATGCCATGACCGAAGCGACCCATCTCATGGCTTCGAACCCTTTACCCGAAAACGGTCCGCATAAACCCGGGTCCGTTGGAAGACCAGTGGGCCAAGAGATGGCGATATTGGATGAAAATGGCGTCCAACAGGAGGCTAACGTGAGTGGGGAAGTGTGTATTAGGGGCCCTAATGTGACCAAGGGTTACAAAAACAACCCTGAGGCTAATAAATCAGCTTTTCAATTCGGGTGGTTTCACACAGGGGATCTCGGGTTCTTTGACCCGGATGGTTATTTGCATCTTGTTGGTCGAATCAAGGAACTCATCAACCGTGGAGGAGAGAAGATATCACCAATCGAAGTGGATGCTGTCCTTTTATCACATCCAGACATTGCTCAAGCGGTTGCTTTTGGGGTTCCAGATGACAAATACGGCGAAGAGATAAACTGTGCCATCATTCCAAGAGAAGGATCAGACATCGATGAAGCAGAGGTAACGAGGTTTTGCAAGAAAAATCTTGCCGCCTTTAAGGTTCCCAAGAAGGTGTTCATCACTGATTCTCTCCCAAAGACGGCTACTGGGAAGATCCAGCGAAGAATTGTGGCTGAGCACTTCCTTGCCCAAATCTCTACTGCTAAAGTCCCAAAGTTTGGGGCATAG 1575 0.52 MMESLTLTGLLKQVAGEFPSRRALSVSGKFDLTYARLHQLVEGAASLILAGGVKAGDVVALTFPNTVEFVIMFLAVIRVRATAAPLNSAYTADEFEFYLSDSESKLLLTSQEGNEAAQAAASKLKITHATASLTEAEAQVNLSLIHSEPDPHSVAKLVNEPSDVALFLHTSGTTSRPKGVPLSQLNLASSVQNIKSVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRFSASTFWSDMLKYDATWYTAVPTIHQIILDRHLSKPEPVYPKLRFIRSCSASLAPAIMARLEEAFGAPVLEAYAMTEATHLMASNPLPENGPHKPGSVGRPVGQEMAILDENGVQQEANVSGEVCIRGPNVTKGYKNNPEANKSAFQFGWFHTGDLGFFDPDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSDIDEAEVTRFCKKNLAAFKVPKKVFITDSLPKTATGKIQRRIVAEHFLAQISTAKVPKFGA* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0910 524 Gene3D - 1 409 IPR042099 -
Vvi16g0910 524 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
Vvi16g0910 524 Pfam AMP-binding enzyme C-terminal domain 425 500 IPR025110 -
Vvi16g0910 524 ProSitePatterns Putative AMP-binding domain signature. 167 178 IPR020845 -
Vvi16g0910 524 Pfam AMP-binding enzyme 12 416 IPR000873 -
Vvi16g0910 524 Gene3D - 410 513 IPR045851 -
Vvi16g0910 524 FunFam 4-coumarate--CoA ligase 2 412 513 - -
Vvi16g0910 524 CDD FACL_fum10p_like 19 508 IPR045310 GO:0016874
Vvi16g0910 524 FunFam Peroxisomal-coenzyme A synthetase 6 409 - -
Vvi16g0910 524 PANTHER ACYL-COA SYNTHETASE 6 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0910 Vvi-Chr16 17209486 17213151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0910 6 514 Monolignol Biosynthesis Gene Families AT4G05160 29.750 2.98e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0910 K22133 - vvi:100256632 1013.06