Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0880 ATGGCCATCGGAGGAAAGGCAGTGCCCTTAAGCTTTGTGGCACATGCCCTAGCGGTTGCAGGAGCGGTTATGGTGCTGGTCTGGTGCATCTACTTCCTGGGCGGCCTCGCCTGGGAAGCCACCAACAAGGCTCTCATCTTCAACCTTCATCCAGTTCTGATGCTAATTGGCTTAGTTATCATAGGAGGCCAAGCTATCATGAGTTATAAATCCCTTCCATTGAGAAAAGAGGTGAAGAAGGTCATACATCTCGTCCTCCATGCCATCGCATTGATCCTCGGAATCATCGGTATCTATGCTGCCTTCAAAAACCATAACGAGAGTGGTATCGCCAATCTATACAGCCTCCACTCCTGGCTTGGAATCGTCCTTATCTCACTCTATGGCATTCAGTGGATATACGGGTTTTTAGTATTCTTCTACCCAGGAGGCACGCTTGGTCTGAGAAGTGCGTCGTTGCCATGGCACGTACTGTTTGGGCTACTGGTGTATGTGCTGGTAGTTGGTAACGCTGAGCTAGGGTTTTTAGAGAAGCTGACGTTCCTTGAGAGTTCGGGTCTGGCTAAGTATGGGGCAGAGGCCTTGCTGGTGAACTTCACTGCTATTGTTACAATATTGTATGGCGTTTTTGTAGTGATGACTGCTCTTTCTCAGCCGCCGCCGGAAGAGGACTACGGTTACTCGGCTATATAG 693 0.4949 MAIGGKAVPLSFVAHALAVAGAVMVLVWCIYFLGGLAWEATNKALIFNLHPVLMLIGLVIIGGQAIMSYKSLPLRKEVKKVIHLVLHAIALILGIIGIYAAFKNHNESGIANLYSLHSWLGIVLISLYGIQWIYGFLVFFYPGGTLGLRSASLPWHVLFGLLVYVLVVGNAELGFLEKLTFLESSGLAKYGAEALLVNFTAIVTILYGVFVVMTALSQPPPEEDYGYSAI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0880 230 CDD Cyt_b561_ACYB-1_like 40 183 - -
Vvi16g0880 230 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Vvi16g0880 230 SMART 561_7 49 175 IPR006593 -
Vvi16g0880 230 Gene3D - 4 224 - -
Vvi16g0880 230 PANTHER CYTOCHROME B561-RELATED 5 217 IPR043205 GO:0016491
Vvi16g0880 230 FunFam Cytochrome b reductase 1 5 224 - -
Vvi16g0880 230 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0880 Vvi-Chr16 16936540 16939180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0880 1 230 Chloroplast and Mitochondria Gene Families AT4G25570 66.527 1.34e-110 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0880 K08360 - vvi:100255839 412.535