Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0814 ATGGGCAAAAATTCCAGATGGTTCCGGCGACTGTTTTCCGGAAAAAAGTCAAAGAGCTCGCCGGCGGCGGAGTCTGTTGGGTCAGACTCAAAGCAGGCGAAGAACAAGAAGAAATGGAGCATCCTCGGATCTGGAAACGCAGAAGAAATTAAGGAGGAGCCGTCGAAGGAGGTCGAGACCCGAATATCGTGTGCAGAGCCCCAGTCAGGTTCACAAGTGGACGCGAGCAGGCACGCCATAACTGTGGCGGCGGCGGCCGCAGCGGTGGCCCAGGCTGCTGTAGCGGCGGCACAGGCGGCAGCGGAGGTTGTGCGGCTCACGAATAGAGGGAAGTGTAGCGGGAGCGGCGGCCGGCGGATGGACGTTGCAGCGGTTATAATACAGTCTGCTTTCAGAGGCTACCTGGCAAGGAGGGCACTGAAGGCACTGAAAGCGCTGGTGAAGCTTCAGGCACTGGTGAGAGGCCACATAGTGCGGAAACGAAGTGCAGATATGCTTAGGCGCATGCAGGCGCTGGCCCGAGTCCAGGCTCGTGCCCGTGTCAGTAGGGCTCGTGCTATCTTAGAGTCCTCCCATTCAACCCGCAGATTCTCCCTATCCCACCACATGAGATGGGGTTCGAATCCAAACATCAGCGATATCTTCAACCGAGAAAAAGCGCAACAGGATTCCAGCTGGTTAGAGCAGTGGATGGAAGAATGTTCCTGGAACGACAGGAGGAGGGACTCTTCACTGAAAACCAGGGATCCTGATCATCATGATGATGAGAGCAGAGACAAGATTCTCGAAGTAGACACCTGGAAACCTGACCCCAACTCCATGGGAAGCAAAAGAATGCACCAGAAATCAACTCCACAATTTTCCAGCTACTACACAAAACCTCAAAAACCAATCTCATGCCAGTCAATGGGGAGGGCGCCCTCATCTTTAAGCTCACTTCAATGCCCGTTTGAAGTAGATGAAGCAGCTGTGTACACTGCAGACAACAGCCCACAAGCTCTTCCTTCTTTGACCAGGCTTGGAAGCAGTAGCGCTAGGAGGAGGAGTACTACAGCCTTGACCCCTCCAAGGACTGACAGCTCCACAAACTTCTTCTCGGACCATCCAAAATACATGGCTAATACGCAGTCTTCCCAGGCAAAGGTCAGGTCCCAAAGTGCCCCCAGGCTCCGGCTTAACTTCGACAAATTGGGTTCTTCCAAGAGATCCTTCCATGGATGCTGGGACCCAAACAGCAGTCCAAATAAGAGCATAATAAACAAAGGCCGATCAGGGTCAGGCTCCGGTTGCTTGGATAGGGTTGGAAGTAGTACTAGATTGAGGTGA 1326 0.5347 MGKNSRWFRRLFSGKKSKSSPAAESVGSDSKQAKNKKKWSILGSGNAEEIKEEPSKEVETRISCAEPQSGSQVDASRHAITVAAAAAAVAQAAVAAAQAAAEVVRLTNRGKCSGSGGRRMDVAAVIIQSAFRGYLARRALKALKALVKLQALVRGHIVRKRSADMLRRMQALARVQARARVSRARAILESSHSTRRFSLSHHMRWGSNPNISDIFNREKAQQDSSWLEQWMEECSWNDRRRDSSLKTRDPDHHDDESRDKILEVDTWKPDPNSMGSKRMHQKSTPQFSSYYTKPQKPISCQSMGRAPSSLSSLQCPFEVDEAAVYTADNSPQALPSLTRLGSSSARRRSTTALTPPRTDSSTNFFSDHPKYMANTQSSQAKVRSQSAPRLRLNFDKLGSSKRSFHGCWDPNSSPNKSIINKGRSGSGSGCLDRVGSSTRLR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0814 441 MobiDBLite consensus disorder prediction 330 368 - -
Vvi16g0814 441 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Vvi16g0814 441 Pfam Protein of unknown function (DUF4005) 346 417 IPR025064 -
Vvi16g0814 441 MobiDBLite consensus disorder prediction 239 293 - -
Vvi16g0814 441 MobiDBLite consensus disorder prediction 239 266 - -
Vvi16g0814 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 165 IPR027417 -
Vvi16g0814 441 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Vvi16g0814 441 MobiDBLite consensus disorder prediction 1 56 - -
Vvi16g0814 441 SMART iq_5 142 163 IPR000048 GO:0005515
Vvi16g0814 441 SMART iq_5 119 141 IPR000048 GO:0005515
Vvi16g0814 441 MobiDBLite consensus disorder prediction 405 441 - -
Vvi16g0814 441 Gene3D - 77 146 - -
Vvi16g0814 441 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Vvi16g0814 441 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Vvi16g0814 441 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
Vvi16g0814 441 MobiDBLite consensus disorder prediction 276 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0814 Vvi-Chr16 16113012 16116943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0814 123 408 IQD Protein Family AT5G07240 40.333 1.63e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0814 - - vvi:104882151 771.155